Gene : Sobic.009G237500 S. bicolor v3.1.1
Defline:  (1 of 1) PF11341 - Protein of unknown function (DUF3143) (DUF3143) Genomic Order:  2452
Name:  ? Sobic.009G237500 Secondary Identifier:  ? PAC:37921328
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G237500 0.5kb upstream 0.5kb upstream 1795 true Chr09: 57575156-57576950 Sorghum bicolor
Sobic.009G237500 0.5kb upstream 0.5kb upstream 500 false Chr09: 57575156-57575655 Sorghum bicolor
Sobic.009G237500 0.5kb downstream 0.5kb downstream 1795 true Chr09: 57575656-57577450 Sorghum bicolor
Sobic.009G237500 0.5kb downstream 0.5kb downstream 500 false Chr09: 57576951-57577450 Sorghum bicolor
Sobic.009G237500 1.0kb upstream 1.0kb upstream 2295 true Chr09: 57574656-57576950 Sorghum bicolor
Sobic.009G237500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 57574656-57575655 Sorghum bicolor
Sobic.009G237500 1.0kb downstream 1.0kb downstream 2295 true Chr09: 57575656-57577950 Sorghum bicolor
Sobic.009G237500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 57576951-57577950 Sorghum bicolor
Sobic.009G237500 2.0kb upstream 2.0kb upstream 3295 true Chr09: 57573656-57576950 Sorghum bicolor
Sobic.009G237500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 57573656-57575655 Sorghum bicolor
Sobic.009G237500 2.0kb downstream 2.0kb downstream 3295 true Chr09: 57575656-57578950 Sorghum bicolor
Sobic.009G237500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 57576951-57578950 Sorghum bicolor
Sobic.009G237500 5.0kb upstream 5.0kb upstream 6295 true Chr09: 57570656-57576950 Sorghum bicolor
Sobic.009G237500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 57570656-57575655 Sorghum bicolor
Sobic.009G237500 5.0kb downstream 5.0kb downstream 6295 true Chr09: 57575656-57581950 Sorghum bicolor
Sobic.009G237500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 57576951-57581950 Sorghum bicolor
Sobic.009G237500 10.0kb upstream 10.0kb upstream 11295 true Chr09: 57565656-57576950 Sorghum bicolor
Sobic.009G237500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 57565656-57575655 Sorghum bicolor
Sobic.009G237500 10.0kb downstream 10.0kb downstream 11295 true Chr09: 57575656-57586950 Sorghum bicolor
Sobic.009G237500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 57576951-57586950 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183518 5267 Panicoideae View MSA
124582930 5269 Grass View MSA
122044446 5273 Angiosperm View MSA
121347894 5274 Embryophyte View MSA
123380669 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.684        
cufflinks 5.186        
cufflinks 5.487        
cufflinks 8.915       High
cufflinks 1.378       Low
cufflinks 11.546       High
cufflinks 5.541        
cufflinks 6.297        
cufflinks 2.188        
cufflinks 2.703        
cufflinks 1.291       Low
cufflinks 1.358       Low
cufflinks 1.509        
cufflinks 1.507        
cufflinks 3.313        
cufflinks 9.675       High
cufflinks 5.509        
cufflinks 8.405       High
cufflinks 4.266        
cufflinks 5.219        
cufflinks 1.869        
cufflinks 2.178        
cufflinks 1.366       Low
cufflinks 0.949       Low
cufflinks 5.593        
cufflinks 3.739        
cufflinks 1.582        
cufflinks 3.824        
cufflinks 13.785     High High
cufflinks 4.524        

0 Strain