Gene : Sobic.009G242100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  2501
Name:  ? Sobic.009G242100 Secondary Identifier:  ? PAC:37921904
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G242100 0.5kb upstream 0.5kb upstream 6224 true Chr09: 57869640-57875863 Sorghum bicolor
Sobic.009G242100 0.5kb upstream 0.5kb upstream 500 false Chr09: 57875364-57875863 Sorghum bicolor
Sobic.009G242100 0.5kb downstream 0.5kb downstream 6224 true Chr09: 57869140-57875363 Sorghum bicolor
Sobic.009G242100 0.5kb downstream 0.5kb downstream 500 false Chr09: 57869140-57869639 Sorghum bicolor
Sobic.009G242100 1.0kb upstream 1.0kb upstream 6724 true Chr09: 57869640-57876363 Sorghum bicolor
Sobic.009G242100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 57875364-57876363 Sorghum bicolor
Sobic.009G242100 1.0kb downstream 1.0kb downstream 6724 true Chr09: 57868640-57875363 Sorghum bicolor
Sobic.009G242100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 57868640-57869639 Sorghum bicolor
Sobic.009G242100 2.0kb upstream 2.0kb upstream 7724 true Chr09: 57869640-57877363 Sorghum bicolor
Sobic.009G242100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 57875364-57877363 Sorghum bicolor
Sobic.009G242100 2.0kb downstream 2.0kb downstream 7724 true Chr09: 57867640-57875363 Sorghum bicolor
Sobic.009G242100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 57867640-57869639 Sorghum bicolor
Sobic.009G242100 5.0kb upstream 5.0kb upstream 10724 true Chr09: 57869640-57880363 Sorghum bicolor
Sobic.009G242100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 57875364-57880363 Sorghum bicolor
Sobic.009G242100 5.0kb downstream 5.0kb downstream 10724 true Chr09: 57864640-57875363 Sorghum bicolor
Sobic.009G242100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 57864640-57869639 Sorghum bicolor
Sobic.009G242100 10.0kb upstream 10.0kb upstream 15724 true Chr09: 57869640-57885363 Sorghum bicolor
Sobic.009G242100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 57875364-57885363 Sorghum bicolor
Sobic.009G242100 10.0kb downstream 10.0kb downstream 15724 true Chr09: 57859640-57875363 Sorghum bicolor
Sobic.009G242100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 57859640-57869639 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183962 5267 Panicoideae View MSA
124582095 5269 Grass View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.081     Low Low
cufflinks 86.507     High High
cufflinks 94.227     High High
cufflinks 34.787     High  
cufflinks 0.053     Low Low
cufflinks 47.17     High  
cufflinks 43.999     High  
cufflinks 46.208     High  
cufflinks 5.01        
cufflinks 4.326        
cufflinks 0.183        
cufflinks 0.178        
cufflinks 8.21        
cufflinks 0.121        
cufflinks 23.791     High  
cufflinks 127.014     High High
cufflinks 34.398     High  
cufflinks 49.402     High  
cufflinks 164.652     High High
cufflinks 27.085     High  
cufflinks 0.031     Low Low
cufflinks 0.101     Low  
cufflinks 0.155        
cufflinks 0.27        
cufflinks 91.379     High High
cufflinks 74.063     High High
cufflinks 0.605        
cufflinks 0.001     Low Low
cufflinks 33.515     High  
cufflinks 19.182     High  

0 Strain