Gene : Sobic.009G244900 S. bicolor v3.1.1
Defline:  (1 of 4) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  2528
Name:  ? Sobic.009G244900 Secondary Identifier:  ? PAC:37921793
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-2541 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G244900 0.5kb upstream 0.5kb upstream 5220 true Chr09: 58064779-58069998 Sorghum bicolor
Sobic.009G244900 0.5kb upstream 0.5kb upstream 500 false Chr09: 58069499-58069998 Sorghum bicolor
Sobic.009G244900 0.5kb downstream 0.5kb downstream 5220 true Chr09: 58064279-58069498 Sorghum bicolor
Sobic.009G244900 0.5kb downstream 0.5kb downstream 500 false Chr09: 58064279-58064778 Sorghum bicolor
Sobic.009G244900 1.0kb upstream 1.0kb upstream 5720 true Chr09: 58064779-58070498 Sorghum bicolor
Sobic.009G244900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 58069499-58070498 Sorghum bicolor
Sobic.009G244900 1.0kb downstream 1.0kb downstream 5720 true Chr09: 58063779-58069498 Sorghum bicolor
Sobic.009G244900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 58063779-58064778 Sorghum bicolor
Sobic.009G244900 2.0kb upstream 2.0kb upstream 6720 true Chr09: 58064779-58071498 Sorghum bicolor
Sobic.009G244900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 58069499-58071498 Sorghum bicolor
Sobic.009G244900 2.0kb downstream 2.0kb downstream 6720 true Chr09: 58062779-58069498 Sorghum bicolor
Sobic.009G244900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 58062779-58064778 Sorghum bicolor
Sobic.009G244900 5.0kb upstream 5.0kb upstream 9720 true Chr09: 58064779-58074498 Sorghum bicolor
Sobic.009G244900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 58069499-58074498 Sorghum bicolor
Sobic.009G244900 5.0kb downstream 5.0kb downstream 9720 true Chr09: 58059779-58069498 Sorghum bicolor
Sobic.009G244900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 58059779-58064778 Sorghum bicolor
Sobic.009G244900 10.0kb upstream 10.0kb upstream 14720 true Chr09: 58064779-58079498 Sorghum bicolor
Sobic.009G244900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 58069499-58079498 Sorghum bicolor
Sobic.009G244900 10.0kb downstream 10.0kb downstream 14720 true Chr09: 58054779-58069498 Sorghum bicolor
Sobic.009G244900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 58054779-58064778 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122194524 5267 Panicoideae View MSA
124575415 5269 Grass View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.424        
cufflinks 0.266       Low
cufflinks 0.411       Low
cufflinks 0.452       Low
cufflinks 3.729        
cufflinks 0.51        
cufflinks 1.843        
cufflinks 0.371       Low
cufflinks 1.408        
cufflinks 1.515        
cufflinks 5.623       High
cufflinks 3.556        
cufflinks 1.582        
cufflinks 4.152        
cufflinks 1.371        
cufflinks 0.128       Low
cufflinks 2.223        
cufflinks 2.355        
cufflinks 0.226       Low
cufflinks 2.32        
cufflinks 4.281        
cufflinks 8.564       High
cufflinks 5.714       High
cufflinks 6.265       High
cufflinks 0.152       Low
cufflinks 0.175       Low
cufflinks 3.809        
cufflinks 0.259       Low
cufflinks 1.782        
cufflinks 1.696        

0 Strain