Gene : Sobic.009G258100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13018//PTHR13018:SF48 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2659
Name:  ? Sobic.009G258100 Secondary Identifier:  ? PAC:37919792
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G258100 0.5kb upstream 0.5kb upstream 7762 true Chr09: 59199453-59207214 Sorghum bicolor
Sobic.009G258100 0.5kb upstream 0.5kb upstream 500 false Chr09: 59199453-59199952 Sorghum bicolor
Sobic.009G258100 0.5kb downstream 0.5kb downstream 7762 true Chr09: 59199953-59207714 Sorghum bicolor
Sobic.009G258100 0.5kb downstream 0.5kb downstream 500 false Chr09: 59207215-59207714 Sorghum bicolor
Sobic.009G258100 1.0kb upstream 1.0kb upstream 8262 true Chr09: 59198953-59207214 Sorghum bicolor
Sobic.009G258100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 59198953-59199952 Sorghum bicolor
Sobic.009G258100 1.0kb downstream 1.0kb downstream 8262 true Chr09: 59199953-59208214 Sorghum bicolor
Sobic.009G258100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 59207215-59208214 Sorghum bicolor
Sobic.009G258100 2.0kb upstream 2.0kb upstream 9262 true Chr09: 59197953-59207214 Sorghum bicolor
Sobic.009G258100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 59197953-59199952 Sorghum bicolor
Sobic.009G258100 2.0kb downstream 2.0kb downstream 9262 true Chr09: 59199953-59209214 Sorghum bicolor
Sobic.009G258100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 59207215-59209214 Sorghum bicolor
Sobic.009G258100 5.0kb upstream 5.0kb upstream 12262 true Chr09: 59194953-59207214 Sorghum bicolor
Sobic.009G258100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 59194953-59199952 Sorghum bicolor
Sobic.009G258100 5.0kb downstream 5.0kb downstream 12262 true Chr09: 59199953-59212214 Sorghum bicolor
Sobic.009G258100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 59207215-59212214 Sorghum bicolor
Sobic.009G258100 10.0kb upstream 10.0kb upstream 17262 true Chr09: 59189953-59207214 Sorghum bicolor
Sobic.009G258100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 59189953-59199952 Sorghum bicolor
Sobic.009G258100 10.0kb downstream 10.0kb downstream 17262 true Chr09: 59199953-59217214 Sorghum bicolor
Sobic.009G258100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 59207215-59217214 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181871 5267 Panicoideae View MSA
124574032 5269 Grass View MSA
122047982 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.527       Low
cufflinks 149.493     High High
cufflinks 210.987     High High
cufflinks 90.624     High High
cufflinks 21.302     High  
cufflinks 38.826     High  
cufflinks 32.757     High  
cufflinks 63.817     High  
cufflinks 18.869     High  
cufflinks 23.994     High  
cufflinks 17.797     High  
cufflinks 19.732     High  
cufflinks 29.959     High  
cufflinks 15.968     High  
cufflinks 53.516     High  
cufflinks 87.935     High High
cufflinks 32.291     High  
cufflinks 34.3     High  
cufflinks 118.224     High High
cufflinks 35.07     High  
cufflinks 15.645     High Low
cufflinks 18.022     High  
cufflinks 17.697     High  
cufflinks 17.524     High  
cufflinks 112.006     High High
cufflinks 100.297     High High
cufflinks 57.0     High  
cufflinks 29.633     High  
cufflinks 28.786     High  
cufflinks 40.367     High  

0 Strain