Gene : Sobic.010G067600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR19378:SF0 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 3 Genomic Order:  688
Name:  ? Sobic.010G067600 Secondary Identifier:  ? PAC:37911416
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G067600 0.5kb upstream 0.5kb upstream 8267   true Chr10: 5424886-5433152 Sorghum bicolor
Sobic.010G067600 0.5kb upstream 0.5kb upstream 500   false Chr10: 5424886-5425385 Sorghum bicolor
Sobic.010G067600 0.5kb downstream 0.5kb downstream 8267   true Chr10: 5425386-5433652 Sorghum bicolor
Sobic.010G067600 0.5kb downstream 0.5kb downstream 500   false Chr10: 5433153-5433652 Sorghum bicolor
Sobic.010G067600 1.0kb upstream 1.0kb upstream 8767   true Chr10: 5424386-5433152 Sorghum bicolor
Sobic.010G067600 1.0kb upstream 1.0kb upstream 1000   false Chr10: 5424386-5425385 Sorghum bicolor
Sobic.010G067600 1.0kb downstream 1.0kb downstream 8767   true Chr10: 5425386-5434152 Sorghum bicolor
Sobic.010G067600 1.0kb downstream 1.0kb downstream 1000   false Chr10: 5433153-5434152 Sorghum bicolor
Sobic.010G067600 2.0kb upstream 2.0kb upstream 9767   true Chr10: 5423386-5433152 Sorghum bicolor
Sobic.010G067600 2.0kb upstream 2.0kb upstream 2000   false Chr10: 5423386-5425385 Sorghum bicolor
Sobic.010G067600 2.0kb downstream 2.0kb downstream 9767   true Chr10: 5425386-5435152 Sorghum bicolor
Sobic.010G067600 2.0kb downstream 2.0kb downstream 2000   false Chr10: 5433153-5435152 Sorghum bicolor
Sobic.010G067600 5.0kb upstream 5.0kb upstream 12767   true Chr10: 5420386-5433152 Sorghum bicolor
Sobic.010G067600 5.0kb upstream 5.0kb upstream 5000   false Chr10: 5420386-5425385 Sorghum bicolor
Sobic.010G067600 5.0kb downstream 5.0kb downstream 12767   true Chr10: 5425386-5438152 Sorghum bicolor
Sobic.010G067600 5.0kb downstream 5.0kb downstream 5000   false Chr10: 5433153-5438152 Sorghum bicolor
Sobic.010G067600 10.0kb upstream 10.0kb upstream 17767   true Chr10: 5415386-5433152 Sorghum bicolor
Sobic.010G067600 10.0kb upstream 10.0kb upstream 10000   false Chr10: 5415386-5425385 Sorghum bicolor
Sobic.010G067600 10.0kb downstream 10.0kb downstream 17767   true Chr10: 5425386-5443152 Sorghum bicolor
Sobic.010G067600 10.0kb downstream 10.0kb downstream 10000   false Chr10: 5433153-5443152 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190130 5267 Panicoideae View MSA
124583407 5269 Grass View MSA
122046057 5273 Angiosperm View MSA
121345822 5274 Embryophyte View MSA
123380274 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.184        
cufflinks 0.229       Low
cufflinks 0.804       Low
cufflinks 1.208       Low
cufflinks 7.265        
cufflinks 1.995        
cufflinks 6.135        
cufflinks 1.547        
cufflinks 3.659        
cufflinks 3.627        
cufflinks 5.686        
cufflinks 5.727        
cufflinks 7.113        
cufflinks 5.109        
cufflinks 3.271        
cufflinks 0.698       Low
cufflinks 6.211        
cufflinks 6.75        
cufflinks 1.115       Low
cufflinks 7.023        
cufflinks 9.158       High
cufflinks 6.676        
cufflinks 6.638        
cufflinks 6.107        
cufflinks 0.615       Low
cufflinks 0.383       Low
cufflinks 7.599        
cufflinks 1.166       Low
cufflinks 5.883        
cufflinks 4.172        

0 Strain