Gene : Sobic.010G033000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11404//PTHR11404:SF17 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  331
Name:  ? Sobic.010G033000 Secondary Identifier:  ? PAC:37909320
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor DETOX1-PWY Sorghum bicolor pathologic  
Sbicolor DETOX1-PWY-1 Sorghum bicolor pathologic  
Sbicolor PWY-6854 Sorghum bicolor pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G033000 0.5kb upstream 0.5kb upstream 3955   true Chr10: 2617904-2621858 Sorghum bicolor
Sobic.010G033000 0.5kb upstream 0.5kb upstream 500   false Chr10: 2617904-2618403 Sorghum bicolor
Sobic.010G033000 0.5kb downstream 0.5kb downstream 3955   true Chr10: 2618404-2622358 Sorghum bicolor
Sobic.010G033000 0.5kb downstream 0.5kb downstream 500   false Chr10: 2621859-2622358 Sorghum bicolor
Sobic.010G033000 1.0kb upstream 1.0kb upstream 4455   true Chr10: 2617404-2621858 Sorghum bicolor
Sobic.010G033000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 2617404-2618403 Sorghum bicolor
Sobic.010G033000 1.0kb downstream 1.0kb downstream 4455   true Chr10: 2618404-2622858 Sorghum bicolor
Sobic.010G033000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 2621859-2622858 Sorghum bicolor
Sobic.010G033000 2.0kb upstream 2.0kb upstream 5455   true Chr10: 2616404-2621858 Sorghum bicolor
Sobic.010G033000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 2616404-2618403 Sorghum bicolor
Sobic.010G033000 2.0kb downstream 2.0kb downstream 5455   true Chr10: 2618404-2623858 Sorghum bicolor
Sobic.010G033000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 2621859-2623858 Sorghum bicolor
Sobic.010G033000 5.0kb upstream 5.0kb upstream 8455   true Chr10: 2613404-2621858 Sorghum bicolor
Sobic.010G033000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 2613404-2618403 Sorghum bicolor
Sobic.010G033000 5.0kb downstream 5.0kb downstream 8455   true Chr10: 2618404-2626858 Sorghum bicolor
Sobic.010G033000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 2621859-2626858 Sorghum bicolor
Sobic.010G033000 10.0kb upstream 10.0kb upstream 13455   true Chr10: 2608404-2621858 Sorghum bicolor
Sobic.010G033000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 2608404-2618403 Sorghum bicolor
Sobic.010G033000 10.0kb downstream 10.0kb downstream 13455   true Chr10: 2618404-2631858 Sorghum bicolor
Sobic.010G033000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 2621859-2631858 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176152 5267 Panicoideae View MSA
124569042 5269 Grass View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.421       Low
cufflinks 0.648        
cufflinks 2.333        
cufflinks 1.07        
cufflinks 1.415        
cufflinks 1.571        
cufflinks 3.9       High
cufflinks 2.685       High
cufflinks 0.996        
cufflinks 0.889        
cufflinks 0.431       Low
cufflinks 0.518        
cufflinks 0.604        
cufflinks 0.379       Low
cufflinks 0.816        
cufflinks 1.739        
cufflinks 3.729       High
cufflinks 4.683       High
cufflinks 1.281        
cufflinks 2.105        
cufflinks 2.229        
cufflinks 0.673        
cufflinks 0.488        
cufflinks 0.551        
cufflinks 0.666        
cufflinks 0.307       Low
cufflinks 0.478        
cufflinks 0.129       Low
cufflinks 9.637       High
cufflinks 1.353        

0 Strain