Gene : Sobic.010G033600 S. bicolor v3.1.1
Defline:  (1 of 1) K10803 - DNA-repair protein XRCC1 (XRCC1) Genomic Order:  336
Name:  ? Sobic.010G033600 Secondary Identifier:  ? PAC:37908944
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G033600 0.5kb upstream 0.5kb upstream 4472   true Chr10: 2683572-2688043 Sorghum bicolor
Sobic.010G033600 0.5kb upstream 0.5kb upstream 500   false Chr10: 2683572-2684071 Sorghum bicolor
Sobic.010G033600 0.5kb downstream 0.5kb downstream 4472   true Chr10: 2684072-2688543 Sorghum bicolor
Sobic.010G033600 0.5kb downstream 0.5kb downstream 500   false Chr10: 2688044-2688543 Sorghum bicolor
Sobic.010G033600 1.0kb upstream 1.0kb upstream 4972   true Chr10: 2683072-2688043 Sorghum bicolor
Sobic.010G033600 1.0kb upstream 1.0kb upstream 1000   false Chr10: 2683072-2684071 Sorghum bicolor
Sobic.010G033600 1.0kb downstream 1.0kb downstream 4972   true Chr10: 2684072-2689043 Sorghum bicolor
Sobic.010G033600 1.0kb downstream 1.0kb downstream 1000   false Chr10: 2688044-2689043 Sorghum bicolor
Sobic.010G033600 2.0kb upstream 2.0kb upstream 5972   true Chr10: 2682072-2688043 Sorghum bicolor
Sobic.010G033600 2.0kb upstream 2.0kb upstream 2000   false Chr10: 2682072-2684071 Sorghum bicolor
Sobic.010G033600 2.0kb downstream 2.0kb downstream 5972   true Chr10: 2684072-2690043 Sorghum bicolor
Sobic.010G033600 2.0kb downstream 2.0kb downstream 2000   false Chr10: 2688044-2690043 Sorghum bicolor
Sobic.010G033600 5.0kb upstream 5.0kb upstream 8972   true Chr10: 2679072-2688043 Sorghum bicolor
Sobic.010G033600 5.0kb upstream 5.0kb upstream 5000   false Chr10: 2679072-2684071 Sorghum bicolor
Sobic.010G033600 5.0kb downstream 5.0kb downstream 8972   true Chr10: 2684072-2693043 Sorghum bicolor
Sobic.010G033600 5.0kb downstream 5.0kb downstream 5000   false Chr10: 2688044-2693043 Sorghum bicolor
Sobic.010G033600 10.0kb upstream 10.0kb upstream 13972   true Chr10: 2674072-2688043 Sorghum bicolor
Sobic.010G033600 10.0kb upstream 10.0kb upstream 10000   false Chr10: 2674072-2684071 Sorghum bicolor
Sobic.010G033600 10.0kb downstream 10.0kb downstream 13972   true Chr10: 2684072-2698043 Sorghum bicolor
Sobic.010G033600 10.0kb downstream 10.0kb downstream 10000   false Chr10: 2688044-2698043 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185099 5267 Panicoideae View MSA
124588508 5269 Grass View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.091        
cufflinks 1.593       Low
cufflinks 3.267        
cufflinks 4.274        
cufflinks 6.157        
cufflinks 9.783       High
cufflinks 4.294        
cufflinks 2.153       Low
cufflinks 7.942       High
cufflinks 7.253       High
cufflinks 3.479        
cufflinks 4.037        
cufflinks 7.038       High
cufflinks 3.78        
cufflinks 6.48        
cufflinks 4.043        
cufflinks 4.23        
cufflinks 4.234        
cufflinks 4.478        
cufflinks 4.26        
cufflinks 11.0       High
cufflinks 4.778        
cufflinks 3.777        
cufflinks 4.098        
cufflinks 2.849       Low
cufflinks 1.591       Low
cufflinks 4.866        
cufflinks 3.568        
cufflinks 2.924       Low
cufflinks 6.507        

0 Strain