Gene : Sobic.010G041400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13697//PTHR13697:SF7 - PHOSPHOFRUCTOKINASE // 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  417
Name:  ? Sobic.010G041400 Secondary Identifier:  ? PAC:37909521
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor ANAEROFRUCAT-PWY Sorghum bicolor pathologic  
Sbicolor ANAGLYCOLYSIS-PWY Sorghum bicolor pathologic  
Sbicolor PWY-1042 Sorghum bicolor pathologic  
Sbicolor PWY-5464 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G041400 0.5kb upstream 0.5kb upstream 4798   true Chr10: 3211354-3216151 Sorghum bicolor
Sobic.010G041400 0.5kb upstream 0.5kb upstream 500   false Chr10: 3215652-3216151 Sorghum bicolor
Sobic.010G041400 0.5kb downstream 0.5kb downstream 4798   true Chr10: 3210854-3215651 Sorghum bicolor
Sobic.010G041400 0.5kb downstream 0.5kb downstream 500   false Chr10: 3210854-3211353 Sorghum bicolor
Sobic.010G041400 1.0kb upstream 1.0kb upstream 5298   true Chr10: 3211354-3216651 Sorghum bicolor
Sobic.010G041400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 3215652-3216651 Sorghum bicolor
Sobic.010G041400 1.0kb downstream 1.0kb downstream 5298   true Chr10: 3210354-3215651 Sorghum bicolor
Sobic.010G041400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 3210354-3211353 Sorghum bicolor
Sobic.010G041400 2.0kb upstream 2.0kb upstream 6298   true Chr10: 3211354-3217651 Sorghum bicolor
Sobic.010G041400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 3215652-3217651 Sorghum bicolor
Sobic.010G041400 2.0kb downstream 2.0kb downstream 6298   true Chr10: 3209354-3215651 Sorghum bicolor
Sobic.010G041400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 3209354-3211353 Sorghum bicolor
Sobic.010G041400 5.0kb upstream 5.0kb upstream 9298   true Chr10: 3211354-3220651 Sorghum bicolor
Sobic.010G041400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 3215652-3220651 Sorghum bicolor
Sobic.010G041400 5.0kb downstream 5.0kb downstream 9298   true Chr10: 3206354-3215651 Sorghum bicolor
Sobic.010G041400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 3206354-3211353 Sorghum bicolor
Sobic.010G041400 10.0kb upstream 10.0kb upstream 14298   true Chr10: 3211354-3225651 Sorghum bicolor
Sobic.010G041400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 3215652-3225651 Sorghum bicolor
Sobic.010G041400 10.0kb downstream 10.0kb downstream 14298   true Chr10: 3201354-3215651 Sorghum bicolor
Sobic.010G041400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 3201354-3211353 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122187432 5267 Panicoideae View MSA
124574509 5269 Grass View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.996       Low
cufflinks 10.824     High Low
cufflinks 19.234     High  
cufflinks 35.898     High High
cufflinks 20.104     High  
cufflinks 22.565     High  
cufflinks 13.784     High  
cufflinks 16.931     High  
cufflinks 43.74     High High
cufflinks 47.518     High High
cufflinks 16.031     High  
cufflinks 26.778     High  
cufflinks 34.677     High High
cufflinks 24.058     High  
cufflinks 27.797     High  
cufflinks 22.292     High  
cufflinks 14.65     High  
cufflinks 14.928     High  
cufflinks 22.964     High  
cufflinks 27.425     High  
cufflinks 18.32     High  
cufflinks 24.323     High  
cufflinks 24.148     High  
cufflinks 23.69     High  
cufflinks 18.117     High  
cufflinks 10.819     High Low
cufflinks 32.442     High High
cufflinks 8.503       Low
cufflinks 15.795     High  
cufflinks 25.026     High  

0 Strain