Gene : Sobic.010G050400 S. bicolor v3.1.1
Defline:  (1 of 1) KOG3420 - Predicted RNA methylase Genomic Order:  510
Name:  ? Sobic.010G050400 Secondary Identifier:  ? PAC:37911777
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G050400 0.5kb upstream 0.5kb upstream 4916   true Chr10: 3887681-3892596 Sorghum bicolor
Sobic.010G050400 0.5kb upstream 0.5kb upstream 500   false Chr10: 3892097-3892596 Sorghum bicolor
Sobic.010G050400 0.5kb downstream 0.5kb downstream 4916   true Chr10: 3887181-3892096 Sorghum bicolor
Sobic.010G050400 0.5kb downstream 0.5kb downstream 500   false Chr10: 3887181-3887680 Sorghum bicolor
Sobic.010G050400 1.0kb upstream 1.0kb upstream 5416   true Chr10: 3887681-3893096 Sorghum bicolor
Sobic.010G050400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 3892097-3893096 Sorghum bicolor
Sobic.010G050400 1.0kb downstream 1.0kb downstream 5416   true Chr10: 3886681-3892096 Sorghum bicolor
Sobic.010G050400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 3886681-3887680 Sorghum bicolor
Sobic.010G050400 2.0kb upstream 2.0kb upstream 6416   true Chr10: 3887681-3894096 Sorghum bicolor
Sobic.010G050400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 3892097-3894096 Sorghum bicolor
Sobic.010G050400 2.0kb downstream 2.0kb downstream 6416   true Chr10: 3885681-3892096 Sorghum bicolor
Sobic.010G050400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 3885681-3887680 Sorghum bicolor
Sobic.010G050400 5.0kb upstream 5.0kb upstream 9416   true Chr10: 3887681-3897096 Sorghum bicolor
Sobic.010G050400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 3892097-3897096 Sorghum bicolor
Sobic.010G050400 5.0kb downstream 5.0kb downstream 9416   true Chr10: 3882681-3892096 Sorghum bicolor
Sobic.010G050400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 3882681-3887680 Sorghum bicolor
Sobic.010G050400 10.0kb upstream 10.0kb upstream 14416   true Chr10: 3887681-3902096 Sorghum bicolor
Sobic.010G050400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 3892097-3902096 Sorghum bicolor
Sobic.010G050400 10.0kb downstream 10.0kb downstream 14416   true Chr10: 3877681-3892096 Sorghum bicolor
Sobic.010G050400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 3877681-3887680 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198058 5267 Panicoideae View MSA
124590241 5269 Grass View MSA
122044343 5273 Angiosperm View MSA
121351641 5274 Embryophyte View MSA
123425114 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.834       High
cufflinks 0.314       Low
cufflinks 0.7        
cufflinks 1.385        
cufflinks 1.041        
cufflinks 2.745       High
cufflinks 0.827        
cufflinks 0.472       Low
cufflinks 2.139       High
cufflinks 1.743        
cufflinks 0.738        
cufflinks 1.108        
cufflinks 1.432        
cufflinks 1.001        
cufflinks 1.505        
cufflinks 0.5       Low
cufflinks 0.945        
cufflinks 0.911        
cufflinks 0.502       Low
cufflinks 1.163        
cufflinks 2.814       High
cufflinks 0.958        
cufflinks 1.08        
cufflinks 1.063        
cufflinks 0.684        
cufflinks 0.264       Low
cufflinks 1.217        
cufflinks 1.908       High
cufflinks 0.647        
cufflinks 1.805       High

0 Strain