Gene : Sobic.010G051400 S. bicolor v3.1.1
Defline:  (1 of 1) K04706 - E3 SUMO-protein ligase PIAS1 (PIAS1) Genomic Order:  521
Name:  ? Sobic.010G051400 Secondary Identifier:  ? PAC:37910953
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G051400 0.5kb upstream 0.5kb upstream 10801   true Chr10: 3980081-3990881 Sorghum bicolor
Sobic.010G051400 0.5kb upstream 0.5kb upstream 500   false Chr10: 3990382-3990881 Sorghum bicolor
Sobic.010G051400 0.5kb downstream 0.5kb downstream 10801   true Chr10: 3979581-3990381 Sorghum bicolor
Sobic.010G051400 0.5kb downstream 0.5kb downstream 500   false Chr10: 3979581-3980080 Sorghum bicolor
Sobic.010G051400 1.0kb upstream 1.0kb upstream 11301   true Chr10: 3980081-3991381 Sorghum bicolor
Sobic.010G051400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 3990382-3991381 Sorghum bicolor
Sobic.010G051400 1.0kb downstream 1.0kb downstream 11301   true Chr10: 3979081-3990381 Sorghum bicolor
Sobic.010G051400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 3979081-3980080 Sorghum bicolor
Sobic.010G051400 2.0kb upstream 2.0kb upstream 12301   true Chr10: 3980081-3992381 Sorghum bicolor
Sobic.010G051400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 3990382-3992381 Sorghum bicolor
Sobic.010G051400 2.0kb downstream 2.0kb downstream 12301   true Chr10: 3978081-3990381 Sorghum bicolor
Sobic.010G051400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 3978081-3980080 Sorghum bicolor
Sobic.010G051400 5.0kb upstream 5.0kb upstream 15301   true Chr10: 3980081-3995381 Sorghum bicolor
Sobic.010G051400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 3990382-3995381 Sorghum bicolor
Sobic.010G051400 5.0kb downstream 5.0kb downstream 15301   true Chr10: 3975081-3990381 Sorghum bicolor
Sobic.010G051400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 3975081-3980080 Sorghum bicolor
Sobic.010G051400 10.0kb upstream 10.0kb upstream 20301   true Chr10: 3980081-4000381 Sorghum bicolor
Sobic.010G051400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 3990382-4000381 Sorghum bicolor
Sobic.010G051400 10.0kb downstream 10.0kb downstream 20301   true Chr10: 3970081-3990381 Sorghum bicolor
Sobic.010G051400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 3970081-3980080 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184726 5267 Panicoideae View MSA
124571498 5269 Grass View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.005        
cufflinks 0.198       Low
cufflinks 0.197       Low
cufflinks 0.374        
cufflinks 0.923        
cufflinks 0.538        
cufflinks 0.521        
cufflinks 0.292       Low
cufflinks 1.559       High
cufflinks 1.735       High
cufflinks 0.73        
cufflinks 0.917        
cufflinks 0.892        
cufflinks 0.751        
cufflinks 1.059        
cufflinks 0.259       Low
cufflinks 0.435        
cufflinks 0.452        
cufflinks 0.426        
cufflinks 0.575        
cufflinks 1.902       High
cufflinks 0.718        
cufflinks 0.692        
cufflinks 0.692        
cufflinks 0.358        
cufflinks 0.215       Low
cufflinks 0.646        
cufflinks 1.203       High
cufflinks 0.4        
cufflinks 1.459       High

0 Strain