Gene : Sobic.007G023300 S. bicolor v3.1.1
Defline:  (1 of 1) K02723 - photosystem II PsbY protein (psbY) Genomic Order:  238
Name:  ? Sobic.007G023300 Secondary Identifier:  ? PAC:37937316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G023300 0.5kb upstream 0.5kb upstream 1112 true Chr07: 2106718-2107829 Sorghum bicolor
Sobic.007G023300 0.5kb upstream 0.5kb upstream 500 false Chr07: 2107330-2107829 Sorghum bicolor
Sobic.007G023300 0.5kb downstream 0.5kb downstream 1112 true Chr07: 2106218-2107329 Sorghum bicolor
Sobic.007G023300 0.5kb downstream 0.5kb downstream 500 false Chr07: 2106218-2106717 Sorghum bicolor
Sobic.007G023300 1.0kb upstream 1.0kb upstream 1612 true Chr07: 2106718-2108329 Sorghum bicolor
Sobic.007G023300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2107330-2108329 Sorghum bicolor
Sobic.007G023300 1.0kb downstream 1.0kb downstream 1612 true Chr07: 2105718-2107329 Sorghum bicolor
Sobic.007G023300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2105718-2106717 Sorghum bicolor
Sobic.007G023300 2.0kb upstream 2.0kb upstream 2612 true Chr07: 2106718-2109329 Sorghum bicolor
Sobic.007G023300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2107330-2109329 Sorghum bicolor
Sobic.007G023300 2.0kb downstream 2.0kb downstream 2612 true Chr07: 2104718-2107329 Sorghum bicolor
Sobic.007G023300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2104718-2106717 Sorghum bicolor
Sobic.007G023300 5.0kb upstream 5.0kb upstream 5612 true Chr07: 2106718-2112329 Sorghum bicolor
Sobic.007G023300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2107330-2112329 Sorghum bicolor
Sobic.007G023300 5.0kb downstream 5.0kb downstream 5612 true Chr07: 2101718-2107329 Sorghum bicolor
Sobic.007G023300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2101718-2106717 Sorghum bicolor
Sobic.007G023300 10.0kb upstream 10.0kb upstream 10612 true Chr07: 2106718-2117329 Sorghum bicolor
Sobic.007G023300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2107330-2117329 Sorghum bicolor
Sobic.007G023300 10.0kb downstream 10.0kb downstream 10612 true Chr07: 2096718-2107329 Sorghum bicolor
Sobic.007G023300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2096718-2106717 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175036 5267 Panicoideae View MSA
124579440 5269 Grass View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.021        
cufflinks 491.545     High High
cufflinks 77.102     High  
cufflinks 74.593     High  
cufflinks 3.614        
cufflinks 54.092     High  
cufflinks 115.834     High High
cufflinks 473.689     High High
cufflinks 1.975        
cufflinks 1.363        
cufflinks 0.189       Low
cufflinks 0.141       Low
cufflinks 1.974        
cufflinks 0.304       Low
cufflinks 12.879     High  
cufflinks 136.715     High High
cufflinks 99.426     High  
cufflinks 100.018     High  
cufflinks 230.38     High High
cufflinks 52.637     High  
cufflinks 0.604        
cufflinks 0.342       Low
cufflinks 0.107       Low
cufflinks 0.323       Low
cufflinks 332.994     High High
cufflinks 471.793     High High
cufflinks 0.082     Low Low
cufflinks 0.946        
cufflinks 155.688     High High
cufflinks 13.52     High  

0 Strain