Gene : Sobic.007G018100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31989//PTHR31989:SF39 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  185
Name:  ? Sobic.007G018100 Secondary Identifier:  ? PAC:37936091
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G018100 0.5kb upstream 0.5kb upstream 5601 true Chr07: 1662532-1668132 Sorghum bicolor
Sobic.007G018100 0.5kb upstream 0.5kb upstream 500 false Chr07: 1662532-1663031 Sorghum bicolor
Sobic.007G018100 0.5kb downstream 0.5kb downstream 5601 true Chr07: 1663032-1668632 Sorghum bicolor
Sobic.007G018100 0.5kb downstream 0.5kb downstream 500 false Chr07: 1668133-1668632 Sorghum bicolor
Sobic.007G018100 1.0kb upstream 1.0kb upstream 6101 true Chr07: 1662032-1668132 Sorghum bicolor
Sobic.007G018100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1662032-1663031 Sorghum bicolor
Sobic.007G018100 1.0kb downstream 1.0kb downstream 6101 true Chr07: 1663032-1669132 Sorghum bicolor
Sobic.007G018100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1668133-1669132 Sorghum bicolor
Sobic.007G018100 2.0kb upstream 2.0kb upstream 7101 true Chr07: 1661032-1668132 Sorghum bicolor
Sobic.007G018100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1661032-1663031 Sorghum bicolor
Sobic.007G018100 2.0kb downstream 2.0kb downstream 7101 true Chr07: 1663032-1670132 Sorghum bicolor
Sobic.007G018100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1668133-1670132 Sorghum bicolor
Sobic.007G018100 5.0kb upstream 5.0kb upstream 10101 true Chr07: 1658032-1668132 Sorghum bicolor
Sobic.007G018100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1658032-1663031 Sorghum bicolor
Sobic.007G018100 5.0kb downstream 5.0kb downstream 10101 true Chr07: 1663032-1673132 Sorghum bicolor
Sobic.007G018100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1668133-1673132 Sorghum bicolor
Sobic.007G018100 10.0kb upstream 10.0kb upstream 15101 true Chr07: 1653032-1668132 Sorghum bicolor
Sobic.007G018100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1653032-1663031 Sorghum bicolor
Sobic.007G018100 10.0kb downstream 10.0kb downstream 15101 true Chr07: 1663032-1678132 Sorghum bicolor
Sobic.007G018100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1668133-1678132 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193012 5267 Panicoideae View MSA
124579736 5269 Grass View MSA
122049306 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.08       Low
cufflinks 0.074       Low
cufflinks 0.054     Low Low
cufflinks 0.913        
cufflinks 1.396        
cufflinks 2.795        
cufflinks 0.447        
cufflinks 0.184        
cufflinks 0.15        
cufflinks 2.806        
cufflinks 3.765        
cufflinks 2.158        
cufflinks 2.026        
cufflinks 0.867        
cufflinks 0.16        
cufflinks 3.179        
cufflinks 2.996        
cufflinks 0.8        
cufflinks 3.68        
cufflinks 0.005     Low Low
cufflinks 1.445        
cufflinks 2.598        
cufflinks 2.593        
cufflinks 0.101        
cufflinks 0.056       Low
cufflinks 1.046        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.543       High
cufflinks 0.772        

0 Strain