Gene : Sobic.007G019100 S. bicolor v3.1.1
Defline:  (1 of 3) K02946 - small subunit ribosomal protein S10 (RP-S10, MRPS10, rpsJ) Genomic Order:  196
Name:  ? Sobic.007G019100 Secondary Identifier:  ? PAC:37937022
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G019100 0.5kb upstream 0.5kb upstream 2605 true Chr07: 1803607-1806211 Sorghum bicolor
Sobic.007G019100 0.5kb upstream 0.5kb upstream 500 false Chr07: 1803607-1804106 Sorghum bicolor
Sobic.007G019100 0.5kb downstream 0.5kb downstream 2605 true Chr07: 1804107-1806711 Sorghum bicolor
Sobic.007G019100 0.5kb downstream 0.5kb downstream 500 false Chr07: 1806212-1806711 Sorghum bicolor
Sobic.007G019100 1.0kb upstream 1.0kb upstream 3105 true Chr07: 1803107-1806211 Sorghum bicolor
Sobic.007G019100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1803107-1804106 Sorghum bicolor
Sobic.007G019100 1.0kb downstream 1.0kb downstream 3105 true Chr07: 1804107-1807211 Sorghum bicolor
Sobic.007G019100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1806212-1807211 Sorghum bicolor
Sobic.007G019100 2.0kb upstream 2.0kb upstream 4105 true Chr07: 1802107-1806211 Sorghum bicolor
Sobic.007G019100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1802107-1804106 Sorghum bicolor
Sobic.007G019100 2.0kb downstream 2.0kb downstream 4105 true Chr07: 1804107-1808211 Sorghum bicolor
Sobic.007G019100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1806212-1808211 Sorghum bicolor
Sobic.007G019100 5.0kb upstream 5.0kb upstream 7105 true Chr07: 1799107-1806211 Sorghum bicolor
Sobic.007G019100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1799107-1804106 Sorghum bicolor
Sobic.007G019100 5.0kb downstream 5.0kb downstream 7105 true Chr07: 1804107-1811211 Sorghum bicolor
Sobic.007G019100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1806212-1811211 Sorghum bicolor
Sobic.007G019100 10.0kb upstream 10.0kb upstream 12105 true Chr07: 1794107-1806211 Sorghum bicolor
Sobic.007G019100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1794107-1804106 Sorghum bicolor
Sobic.007G019100 10.0kb downstream 10.0kb downstream 12105 true Chr07: 1804107-1816211 Sorghum bicolor
Sobic.007G019100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1806212-1816211 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
122199151 5267 Panicoideae View MSA
124589014 5269 Grass View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.314     High High
cufflinks 5.821       Low
cufflinks 10.074     High  
cufflinks 16.121     High  
cufflinks 12.469        
cufflinks 16.259     High  
cufflinks 13.148     High  
cufflinks 4.486       Low
cufflinks 11.348        
cufflinks 13.297     High  
cufflinks 13.972     High  
cufflinks 16.321     High  
cufflinks 11.728     High  
cufflinks 17.148     High  
cufflinks 9.959        
cufflinks 9.996     High  
cufflinks 15.355     High  
cufflinks 14.962     High  
cufflinks 7.758       Low
cufflinks 16.871     High  
cufflinks 12.072        
cufflinks 19.341     High High
cufflinks 19.262     High  
cufflinks 19.424     High High
cufflinks 6.328       Low
cufflinks 3.911       Low
cufflinks 12.537     High  
cufflinks 8.627        
cufflinks 8.664        
cufflinks 7.943       Low

0 Strain