Gene : Sobic.007G009600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33978//PTHR33978:SF2 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  101
Name:  ? Sobic.007G009600 Secondary Identifier:  ? PAC:37936796
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G009600 0.5kb upstream 0.5kb upstream 2516 true Chr07: 886359-888874 Sorghum bicolor
Sobic.007G009600 0.5kb upstream 0.5kb upstream 500 false Chr07: 888375-888874 Sorghum bicolor
Sobic.007G009600 0.5kb downstream 0.5kb downstream 2516 true Chr07: 885859-888374 Sorghum bicolor
Sobic.007G009600 0.5kb downstream 0.5kb downstream 500 false Chr07: 885859-886358 Sorghum bicolor
Sobic.007G009600 1.0kb upstream 1.0kb upstream 3016 true Chr07: 886359-889374 Sorghum bicolor
Sobic.007G009600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 888375-889374 Sorghum bicolor
Sobic.007G009600 1.0kb downstream 1.0kb downstream 3016 true Chr07: 885359-888374 Sorghum bicolor
Sobic.007G009600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 885359-886358 Sorghum bicolor
Sobic.007G009600 2.0kb upstream 2.0kb upstream 4016 true Chr07: 886359-890374 Sorghum bicolor
Sobic.007G009600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 888375-890374 Sorghum bicolor
Sobic.007G009600 2.0kb downstream 2.0kb downstream 4016 true Chr07: 884359-888374 Sorghum bicolor
Sobic.007G009600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 884359-886358 Sorghum bicolor
Sobic.007G009600 5.0kb upstream 5.0kb upstream 7016 true Chr07: 886359-893374 Sorghum bicolor
Sobic.007G009600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 888375-893374 Sorghum bicolor
Sobic.007G009600 5.0kb downstream 5.0kb downstream 7016 true Chr07: 881359-888374 Sorghum bicolor
Sobic.007G009600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 881359-886358 Sorghum bicolor
Sobic.007G009600 10.0kb upstream 10.0kb upstream 12016 true Chr07: 886359-898374 Sorghum bicolor
Sobic.007G009600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 888375-898374 Sorghum bicolor
Sobic.007G009600 10.0kb downstream 10.0kb downstream 12016 true Chr07: 876359-888374 Sorghum bicolor
Sobic.007G009600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 876359-886358 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122197129 5267 Panicoideae View MSA
124578874 5269 Grass View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.224       High
cufflinks 1.092       High
cufflinks 0.009     Low Low
cufflinks 0.006     Low Low
cufflinks 0.014     Low  
cufflinks 0.07     Low  
cufflinks 0.016     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.312       High
cufflinks 0.294       High
cufflinks 0.026     Low  
cufflinks 0.439       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.084     Low  
cufflinks 0.054     Low  
cufflinks 0.016     Low  
cufflinks 0.083        
cufflinks 0.052     Low  
cufflinks 0.201       High
cufflinks 0.344       High
cufflinks 0.027     Low  

0 Strain