Gene : Sobic.007G005400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24078:SF315 - MOLECULAR CHAPERONE DNAJ Genomic Order:  56
Name:  ? Sobic.007G005400 Secondary Identifier:  ? PAC:37936781
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G005400 0.5kb upstream 0.5kb upstream 5343 true Chr07: 468476-473818 Sorghum bicolor
Sobic.007G005400 0.5kb upstream 0.5kb upstream 500 false Chr07: 468476-468975 Sorghum bicolor
Sobic.007G005400 0.5kb downstream 0.5kb downstream 5343 true Chr07: 468976-474318 Sorghum bicolor
Sobic.007G005400 0.5kb downstream 0.5kb downstream 500 false Chr07: 473819-474318 Sorghum bicolor
Sobic.007G005400 1.0kb upstream 1.0kb upstream 5843 true Chr07: 467976-473818 Sorghum bicolor
Sobic.007G005400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 467976-468975 Sorghum bicolor
Sobic.007G005400 1.0kb downstream 1.0kb downstream 5843 true Chr07: 468976-474818 Sorghum bicolor
Sobic.007G005400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 473819-474818 Sorghum bicolor
Sobic.007G005400 2.0kb upstream 2.0kb upstream 6843 true Chr07: 466976-473818 Sorghum bicolor
Sobic.007G005400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 466976-468975 Sorghum bicolor
Sobic.007G005400 2.0kb downstream 2.0kb downstream 6843 true Chr07: 468976-475818 Sorghum bicolor
Sobic.007G005400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 473819-475818 Sorghum bicolor
Sobic.007G005400 5.0kb upstream 5.0kb upstream 9843 true Chr07: 463976-473818 Sorghum bicolor
Sobic.007G005400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 463976-468975 Sorghum bicolor
Sobic.007G005400 5.0kb downstream 5.0kb downstream 9843 true Chr07: 468976-478818 Sorghum bicolor
Sobic.007G005400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 473819-478818 Sorghum bicolor
Sobic.007G005400 10.0kb upstream 10.0kb upstream 14843 true Chr07: 458976-473818 Sorghum bicolor
Sobic.007G005400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 458976-468975 Sorghum bicolor
Sobic.007G005400 10.0kb downstream 10.0kb downstream 14843 true Chr07: 468976-483818 Sorghum bicolor
Sobic.007G005400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 473819-483818 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176553 5267 Panicoideae View MSA
124586416 5269 Grass View MSA
122046285 5273 Angiosperm View MSA
121345054 5274 Embryophyte View MSA
123424364 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.244     High  
cufflinks 16.023     High  
cufflinks 26.073     High High
cufflinks 20.471     High  
cufflinks 12.028        
cufflinks 25.386     High High
cufflinks 29.134     High High
cufflinks 20.629     High  
cufflinks 15.921     High  
cufflinks 16.015     High  
cufflinks 7.643       Low
cufflinks 10.868        
cufflinks 16.222     High  
cufflinks 7.497       Low
cufflinks 13.675     High  
cufflinks 23.078     High  
cufflinks 29.858     High High
cufflinks 37.939     High High
cufflinks 24.479     High High
cufflinks 27.003     High High
cufflinks 12.639        
cufflinks 8.47       Low
cufflinks 9.194        
cufflinks 8.573       Low
cufflinks 20.057     High  
cufflinks 16.477     High  
cufflinks 9.434        
cufflinks 12.644     High  
cufflinks 46.052     High High
cufflinks 14.226     High  

0 Strain