Gene : Sobic.007G000200 S. bicolor v3.1.1
Defline:  (1 of 11) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  3
Name:  ? Sobic.007G000200 Secondary Identifier:  ? PAC:37934438
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G000200 0.5kb upstream 0.5kb upstream 6902 true Chr07: 28321-35222 Sorghum bicolor
Sobic.007G000200 0.5kb upstream 0.5kb upstream 500 false Chr07: 28321-28820 Sorghum bicolor
Sobic.007G000200 0.5kb downstream 0.5kb downstream 6902 true Chr07: 28821-35722 Sorghum bicolor
Sobic.007G000200 0.5kb downstream 0.5kb downstream 500 false Chr07: 35223-35722 Sorghum bicolor
Sobic.007G000200 1.0kb upstream 1.0kb upstream 7402 true Chr07: 27821-35222 Sorghum bicolor
Sobic.007G000200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27821-28820 Sorghum bicolor
Sobic.007G000200 1.0kb downstream 1.0kb downstream 7402 true Chr07: 28821-36222 Sorghum bicolor
Sobic.007G000200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35223-36222 Sorghum bicolor
Sobic.007G000200 2.0kb upstream 2.0kb upstream 8402 true Chr07: 26821-35222 Sorghum bicolor
Sobic.007G000200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 26821-28820 Sorghum bicolor
Sobic.007G000200 2.0kb downstream 2.0kb downstream 8402 true Chr07: 28821-37222 Sorghum bicolor
Sobic.007G000200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35223-37222 Sorghum bicolor
Sobic.007G000200 5.0kb upstream 5.0kb upstream 11402 true Chr07: 23821-35222 Sorghum bicolor
Sobic.007G000200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 23821-28820 Sorghum bicolor
Sobic.007G000200 5.0kb downstream 5.0kb downstream 11402 true Chr07: 28821-40222 Sorghum bicolor
Sobic.007G000200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35223-40222 Sorghum bicolor
Sobic.007G000200 10.0kb upstream 10.0kb upstream 16402 true Chr07: 18821-35222 Sorghum bicolor
Sobic.007G000200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18821-28820 Sorghum bicolor
Sobic.007G000200 10.0kb downstream 10.0kb downstream 16402 true Chr07: 28821-45222 Sorghum bicolor
Sobic.007G000200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35223-45222 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184749 5267 Panicoideae View MSA
124579046 5269 Grass View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.063       Low
cufflinks 6.976     High  
cufflinks 2.986       Low
cufflinks 3.856       Low
cufflinks 10.494        
cufflinks 8.769        
cufflinks 15.185     High  
cufflinks 7.558        
cufflinks 11.604        
cufflinks 10.654        
cufflinks 17.871     High High
cufflinks 15.518     High  
cufflinks 16.544     High High
cufflinks 14.551     High  
cufflinks 12.925     High  
cufflinks 5.771       Low
cufflinks 13.301     High  
cufflinks 12.628     High  
cufflinks 6.626        
cufflinks 9.172        
cufflinks 13.385        
cufflinks 12.332     High  
cufflinks 19.258     High High
cufflinks 18.311     High High
cufflinks 9.178     High  
cufflinks 6.126        
cufflinks 8.84        
cufflinks 2.991       Low
cufflinks 8.734        
cufflinks 14.841     High  

0 Strain