Gene : Sobic.007G056600 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  591
Name:  ? Sobic.007G056600 Secondary Identifier:  ? PAC:37934654
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G056600 0.5kb upstream 0.5kb upstream 3914 true Chr07: 5826665-5830578 Sorghum bicolor
Sobic.007G056600 0.5kb upstream 0.5kb upstream 500 false Chr07: 5826665-5827164 Sorghum bicolor
Sobic.007G056600 0.5kb downstream 0.5kb downstream 3914 true Chr07: 5827165-5831078 Sorghum bicolor
Sobic.007G056600 0.5kb downstream 0.5kb downstream 500 false Chr07: 5830579-5831078 Sorghum bicolor
Sobic.007G056600 1.0kb upstream 1.0kb upstream 4414 true Chr07: 5826165-5830578 Sorghum bicolor
Sobic.007G056600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5826165-5827164 Sorghum bicolor
Sobic.007G056600 1.0kb downstream 1.0kb downstream 4414 true Chr07: 5827165-5831578 Sorghum bicolor
Sobic.007G056600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5830579-5831578 Sorghum bicolor
Sobic.007G056600 2.0kb upstream 2.0kb upstream 5414 true Chr07: 5825165-5830578 Sorghum bicolor
Sobic.007G056600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5825165-5827164 Sorghum bicolor
Sobic.007G056600 2.0kb downstream 2.0kb downstream 5414 true Chr07: 5827165-5832578 Sorghum bicolor
Sobic.007G056600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5830579-5832578 Sorghum bicolor
Sobic.007G056600 5.0kb upstream 5.0kb upstream 8414 true Chr07: 5822165-5830578 Sorghum bicolor
Sobic.007G056600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5822165-5827164 Sorghum bicolor
Sobic.007G056600 5.0kb downstream 5.0kb downstream 8414 true Chr07: 5827165-5835578 Sorghum bicolor
Sobic.007G056600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5830579-5835578 Sorghum bicolor
Sobic.007G056600 10.0kb upstream 10.0kb upstream 13414 true Chr07: 5817165-5830578 Sorghum bicolor
Sobic.007G056600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5817165-5827164 Sorghum bicolor
Sobic.007G056600 10.0kb downstream 10.0kb downstream 13414 true Chr07: 5827165-5840578 Sorghum bicolor
Sobic.007G056600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5830579-5840578 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188177 5267 Panicoideae View MSA
124585362 5269 Grass View MSA
122042514 5273 Angiosperm View MSA
121347844 5274 Embryophyte View MSA
123425000 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.67        
cufflinks 1.427       Low
cufflinks 3.67        
cufflinks 7.078        
cufflinks 4.73        
cufflinks 11.011       High
cufflinks 4.537        
cufflinks 2.285       Low
cufflinks 11.426       High
cufflinks 10.134       High
cufflinks 2.578       Low
cufflinks 4.387        
cufflinks 8.746       High
cufflinks 2.843        
cufflinks 7.097        
cufflinks 4.471        
cufflinks 5.391        
cufflinks 4.349        
cufflinks 4.278        
cufflinks 7.923       High
cufflinks 5.304        
cufflinks 3.265        
cufflinks 3.779        
cufflinks 3.38        
cufflinks 3.589        
cufflinks 1.426       Low
cufflinks 3.58        
cufflinks 14.793     High High
cufflinks 3.081        
cufflinks 5.782        

0 Strain