Gene : Sobic.007G053100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  559
Name:  ? Sobic.007G053100 Secondary Identifier:  ? PAC:37935661
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G053100 0.5kb upstream 0.5kb upstream 8073 true Chr07: 5392817-5400889 Sorghum bicolor
Sobic.007G053100 0.5kb upstream 0.5kb upstream 500 false Chr07: 5392817-5393316 Sorghum bicolor
Sobic.007G053100 0.5kb downstream 0.5kb downstream 8073 true Chr07: 5393317-5401389 Sorghum bicolor
Sobic.007G053100 0.5kb downstream 0.5kb downstream 500 false Chr07: 5400890-5401389 Sorghum bicolor
Sobic.007G053100 1.0kb upstream 1.0kb upstream 8573 true Chr07: 5392317-5400889 Sorghum bicolor
Sobic.007G053100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5392317-5393316 Sorghum bicolor
Sobic.007G053100 1.0kb downstream 1.0kb downstream 8573 true Chr07: 5393317-5401889 Sorghum bicolor
Sobic.007G053100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5400890-5401889 Sorghum bicolor
Sobic.007G053100 2.0kb upstream 2.0kb upstream 9573 true Chr07: 5391317-5400889 Sorghum bicolor
Sobic.007G053100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5391317-5393316 Sorghum bicolor
Sobic.007G053100 2.0kb downstream 2.0kb downstream 9573 true Chr07: 5393317-5402889 Sorghum bicolor
Sobic.007G053100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5400890-5402889 Sorghum bicolor
Sobic.007G053100 5.0kb upstream 5.0kb upstream 12573 true Chr07: 5388317-5400889 Sorghum bicolor
Sobic.007G053100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5388317-5393316 Sorghum bicolor
Sobic.007G053100 5.0kb downstream 5.0kb downstream 12573 true Chr07: 5393317-5405889 Sorghum bicolor
Sobic.007G053100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5400890-5405889 Sorghum bicolor
Sobic.007G053100 10.0kb upstream 10.0kb upstream 17573 true Chr07: 5383317-5400889 Sorghum bicolor
Sobic.007G053100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5383317-5393316 Sorghum bicolor
Sobic.007G053100 10.0kb downstream 10.0kb downstream 17573 true Chr07: 5393317-5410889 Sorghum bicolor
Sobic.007G053100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5400890-5410889 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181524 5267 Panicoideae View MSA
124570310 5269 Grass View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.955        
cufflinks 1.021       Low
cufflinks 3.846        
cufflinks 5.482        
cufflinks 11.504        
cufflinks 4.711        
cufflinks 5.129        
cufflinks 2.387       Low
cufflinks 11.867       High
cufflinks 10.25        
cufflinks 5.588        
cufflinks 9.216        
cufflinks 11.779     High High
cufflinks 8.306        
cufflinks 9.078        
cufflinks 3.408        
cufflinks 5.244        
cufflinks 5.035        
cufflinks 2.663       Low
cufflinks 6.959        
cufflinks 8.669        
cufflinks 7.554        
cufflinks 8.311        
cufflinks 8.572        
cufflinks 1.711       Low
cufflinks 1.046       Low
cufflinks 6.335        
cufflinks 15.426     High High
cufflinks 3.365        
cufflinks 10.219        

0 Strain