Gene : Sobic.007G043700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10972//PTHR10972:SF84 - OXYSTEROL-BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  457
Name:  ? Sobic.007G043700 Secondary Identifier:  ? PAC:37936475
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G043700 0.5kb upstream 0.5kb upstream 7271 true Chr07: 4373937-4381207 Sorghum bicolor
Sobic.007G043700 0.5kb upstream 0.5kb upstream 500 false Chr07: 4373937-4374436 Sorghum bicolor
Sobic.007G043700 0.5kb downstream 0.5kb downstream 7271 true Chr07: 4374437-4381707 Sorghum bicolor
Sobic.007G043700 0.5kb downstream 0.5kb downstream 500 false Chr07: 4381208-4381707 Sorghum bicolor
Sobic.007G043700 1.0kb upstream 1.0kb upstream 7771 true Chr07: 4373437-4381207 Sorghum bicolor
Sobic.007G043700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4373437-4374436 Sorghum bicolor
Sobic.007G043700 1.0kb downstream 1.0kb downstream 7771 true Chr07: 4374437-4382207 Sorghum bicolor
Sobic.007G043700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4381208-4382207 Sorghum bicolor
Sobic.007G043700 2.0kb upstream 2.0kb upstream 8771 true Chr07: 4372437-4381207 Sorghum bicolor
Sobic.007G043700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4372437-4374436 Sorghum bicolor
Sobic.007G043700 2.0kb downstream 2.0kb downstream 8771 true Chr07: 4374437-4383207 Sorghum bicolor
Sobic.007G043700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4381208-4383207 Sorghum bicolor
Sobic.007G043700 5.0kb upstream 5.0kb upstream 11771 true Chr07: 4369437-4381207 Sorghum bicolor
Sobic.007G043700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4369437-4374436 Sorghum bicolor
Sobic.007G043700 5.0kb downstream 5.0kb downstream 11771 true Chr07: 4374437-4386207 Sorghum bicolor
Sobic.007G043700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4381208-4386207 Sorghum bicolor
Sobic.007G043700 10.0kb upstream 10.0kb upstream 16771 true Chr07: 4364437-4381207 Sorghum bicolor
Sobic.007G043700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4364437-4374436 Sorghum bicolor
Sobic.007G043700 10.0kb downstream 10.0kb downstream 16771 true Chr07: 4374437-4391207 Sorghum bicolor
Sobic.007G043700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4381208-4391207 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187527 5267 Panicoideae View MSA
124588741 5269 Grass View MSA
122049875 5273 Angiosperm View MSA
121348074 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.921        
cufflinks 0.502       Low
cufflinks 0.528       Low
cufflinks 0.426       Low
cufflinks 5.321       High
cufflinks 0.958        
cufflinks 2.37        
cufflinks 0.771        
cufflinks 1.137        
cufflinks 1.786        
cufflinks 2.016        
cufflinks 2.308        
cufflinks 2.826        
cufflinks 2.219        
cufflinks 4.731       High
cufflinks 0.411       Low
cufflinks 2.358        
cufflinks 2.342        
cufflinks 0.602       Low
cufflinks 2.197        
cufflinks 8.155       High
cufflinks 2.419        
cufflinks 2.476        
cufflinks 2.479        
cufflinks 0.323       Low
cufflinks 0.557       Low
cufflinks 1.732        
cufflinks 0.701       Low
cufflinks 2.315        
cufflinks 2.624        

0 Strain