Gene : Sobic.007G043200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10509//PTHR10509:SF27 - O-METHYLTRANSFERASE-RELATED // PROTEIN COMT-1 Genomic Order:  452
Name:  ? Sobic.007G043200 Secondary Identifier:  ? PAC:37934502
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-1121 Sorghum bicolor pathologic  
Sbicolor PWY-361 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G043200 0.5kb upstream 0.5kb upstream 4441 true Chr07: 4324070-4328510 Sorghum bicolor
Sobic.007G043200 0.5kb upstream 0.5kb upstream 500 false Chr07: 4324070-4324569 Sorghum bicolor
Sobic.007G043200 0.5kb downstream 0.5kb downstream 4441 true Chr07: 4324570-4329010 Sorghum bicolor
Sobic.007G043200 0.5kb downstream 0.5kb downstream 500 false Chr07: 4328511-4329010 Sorghum bicolor
Sobic.007G043200 1.0kb upstream 1.0kb upstream 4941 true Chr07: 4323570-4328510 Sorghum bicolor
Sobic.007G043200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4323570-4324569 Sorghum bicolor
Sobic.007G043200 1.0kb downstream 1.0kb downstream 4941 true Chr07: 4324570-4329510 Sorghum bicolor
Sobic.007G043200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4328511-4329510 Sorghum bicolor
Sobic.007G043200 2.0kb upstream 2.0kb upstream 5941 true Chr07: 4322570-4328510 Sorghum bicolor
Sobic.007G043200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4322570-4324569 Sorghum bicolor
Sobic.007G043200 2.0kb downstream 2.0kb downstream 5941 true Chr07: 4324570-4330510 Sorghum bicolor
Sobic.007G043200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4328511-4330510 Sorghum bicolor
Sobic.007G043200 5.0kb upstream 5.0kb upstream 8941 true Chr07: 4319570-4328510 Sorghum bicolor
Sobic.007G043200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4319570-4324569 Sorghum bicolor
Sobic.007G043200 5.0kb downstream 5.0kb downstream 8941 true Chr07: 4324570-4333510 Sorghum bicolor
Sobic.007G043200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4328511-4333510 Sorghum bicolor
Sobic.007G043200 10.0kb upstream 10.0kb upstream 13941 true Chr07: 4314570-4328510 Sorghum bicolor
Sobic.007G043200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4314570-4324569 Sorghum bicolor
Sobic.007G043200 10.0kb downstream 10.0kb downstream 13941 true Chr07: 4324570-4338510 Sorghum bicolor
Sobic.007G043200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4328511-4338510 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175186 5267 Panicoideae View MSA
124588740 5269 Grass View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.991        
cufflinks 0.749       Low
cufflinks 1.841        
cufflinks 1.981        
cufflinks 2.251        
cufflinks 3.911       High
cufflinks 1.574        
cufflinks 1.705        
cufflinks 2.569       High
cufflinks 2.574       High
cufflinks 0.941        
cufflinks 0.969        
cufflinks 1.52        
cufflinks 1.01        
cufflinks 2.169        
cufflinks 1.866        
cufflinks 1.387        
cufflinks 1.954        
cufflinks 1.26        
cufflinks 1.349        
cufflinks 3.761       High
cufflinks 0.988        
cufflinks 0.846       Low
cufflinks 0.748       Low
cufflinks 0.942        
cufflinks 0.659       Low
cufflinks 1.395        
cufflinks 0.407       Low
cufflinks 3.747       High
cufflinks 2.7       High

0 Strain