Gene : Sobic.007G029200 S. bicolor v3.1.1
Defline:  similar to Myosin heavy chain-like protein Genomic Order:  301
Name:  ? Sobic.007G029200 Secondary Identifier:  ? PAC:37935545
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G029200 0.5kb upstream 0.5kb upstream 5165 true Chr07: 2685595-2690759 Sorghum bicolor
Sobic.007G029200 0.5kb upstream 0.5kb upstream 500 false Chr07: 2690260-2690759 Sorghum bicolor
Sobic.007G029200 0.5kb downstream 0.5kb downstream 5165 true Chr07: 2685095-2690259 Sorghum bicolor
Sobic.007G029200 0.5kb downstream 0.5kb downstream 500 false Chr07: 2685095-2685594 Sorghum bicolor
Sobic.007G029200 1.0kb upstream 1.0kb upstream 5665 true Chr07: 2685595-2691259 Sorghum bicolor
Sobic.007G029200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2690260-2691259 Sorghum bicolor
Sobic.007G029200 1.0kb downstream 1.0kb downstream 5665 true Chr07: 2684595-2690259 Sorghum bicolor
Sobic.007G029200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2684595-2685594 Sorghum bicolor
Sobic.007G029200 2.0kb upstream 2.0kb upstream 6665 true Chr07: 2685595-2692259 Sorghum bicolor
Sobic.007G029200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2690260-2692259 Sorghum bicolor
Sobic.007G029200 2.0kb downstream 2.0kb downstream 6665 true Chr07: 2683595-2690259 Sorghum bicolor
Sobic.007G029200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2683595-2685594 Sorghum bicolor
Sobic.007G029200 5.0kb upstream 5.0kb upstream 9665 true Chr07: 2685595-2695259 Sorghum bicolor
Sobic.007G029200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2690260-2695259 Sorghum bicolor
Sobic.007G029200 5.0kb downstream 5.0kb downstream 9665 true Chr07: 2680595-2690259 Sorghum bicolor
Sobic.007G029200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2680595-2685594 Sorghum bicolor
Sobic.007G029200 10.0kb upstream 10.0kb upstream 14665 true Chr07: 2685595-2700259 Sorghum bicolor
Sobic.007G029200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2690260-2700259 Sorghum bicolor
Sobic.007G029200 10.0kb downstream 10.0kb downstream 14665 true Chr07: 2675595-2690259 Sorghum bicolor
Sobic.007G029200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2675595-2685594 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041414 5273 Angiosperm View MSA
122194995 5267 Panicoideae View MSA
124580373 5269 Grass View MSA
121349870 5274 Embryophyte View MSA
123381480 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.275        
cufflinks 0.762       Low
cufflinks 2.052       Low
cufflinks 5.955        
cufflinks 6.799        
cufflinks 5.899        
cufflinks 3.805        
cufflinks 2.984        
cufflinks 12.425     High High
cufflinks 10.295       High
cufflinks 6.02        
cufflinks 9.587       High
cufflinks 6.328        
cufflinks 6.295        
cufflinks 4.757        
cufflinks 1.055       Low
cufflinks 4.159        
cufflinks 4.499        
cufflinks 1.955       Low
cufflinks 6.146        
cufflinks 21.78     High High
cufflinks 5.048        
cufflinks 7.737        
cufflinks 6.884        
cufflinks 1.045       Low
cufflinks 2.386        
cufflinks 4.899        
cufflinks 2.489        
cufflinks 2.233       Low
cufflinks 5.759        

0 Strain