Gene : Sobic.007G029400 S. bicolor v3.1.1
Defline:  (1 of 2) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  303
Name:  ? Sobic.007G029400 Secondary Identifier:  ? PAC:37935707
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G029400 0.5kb upstream 0.5kb upstream 3058 true Chr07: 2696382-2699439 Sorghum bicolor
Sobic.007G029400 0.5kb upstream 0.5kb upstream 500 false Chr07: 2698940-2699439 Sorghum bicolor
Sobic.007G029400 0.5kb downstream 0.5kb downstream 3058 true Chr07: 2695882-2698939 Sorghum bicolor
Sobic.007G029400 0.5kb downstream 0.5kb downstream 500 false Chr07: 2695882-2696381 Sorghum bicolor
Sobic.007G029400 1.0kb upstream 1.0kb upstream 3558 true Chr07: 2696382-2699939 Sorghum bicolor
Sobic.007G029400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2698940-2699939 Sorghum bicolor
Sobic.007G029400 1.0kb downstream 1.0kb downstream 3558 true Chr07: 2695382-2698939 Sorghum bicolor
Sobic.007G029400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2695382-2696381 Sorghum bicolor
Sobic.007G029400 2.0kb upstream 2.0kb upstream 4558 true Chr07: 2696382-2700939 Sorghum bicolor
Sobic.007G029400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2698940-2700939 Sorghum bicolor
Sobic.007G029400 2.0kb downstream 2.0kb downstream 4558 true Chr07: 2694382-2698939 Sorghum bicolor
Sobic.007G029400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2694382-2696381 Sorghum bicolor
Sobic.007G029400 5.0kb upstream 5.0kb upstream 7558 true Chr07: 2696382-2703939 Sorghum bicolor
Sobic.007G029400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2698940-2703939 Sorghum bicolor
Sobic.007G029400 5.0kb downstream 5.0kb downstream 7558 true Chr07: 2691382-2698939 Sorghum bicolor
Sobic.007G029400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2691382-2696381 Sorghum bicolor
Sobic.007G029400 10.0kb upstream 10.0kb upstream 12558 true Chr07: 2696382-2708939 Sorghum bicolor
Sobic.007G029400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2698940-2708939 Sorghum bicolor
Sobic.007G029400 10.0kb downstream 10.0kb downstream 12558 true Chr07: 2686382-2698939 Sorghum bicolor
Sobic.007G029400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2686382-2696381 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186739 5267 Panicoideae View MSA
124582376 5269 Grass View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 879.342     High High
cufflinks 27.549     High Low
cufflinks 115.487     High  
cufflinks 157.799     High  
cufflinks 334.699     High  
cufflinks 153.032     High  
cufflinks 285.901     High  
cufflinks 42.253     High Low
cufflinks 204.137     High  
cufflinks 240.859     High  
cufflinks 355.126     High  
cufflinks 307.6     High  
cufflinks 182.803     High  
cufflinks 359.229     High  
cufflinks 162.221     High  
cufflinks 75.245     High Low
cufflinks 318.637     High  
cufflinks 309.224     High  
cufflinks 86.571     High Low
cufflinks 243.385     High  
cufflinks 525.793     High  
cufflinks 536.369     High  
cufflinks 437.332     High  
cufflinks 523.134     High  
cufflinks 48.374     High Low
cufflinks 19.708     High Low
cufflinks 237.202     High  
cufflinks 550.867     High High
cufflinks 204.947     High  
cufflinks 256.333     High  

0 Strain