Gene : Sobic.007G027900 S. bicolor v3.1.1
Defline:  similar to Proline-rich protein family-like Genomic Order:  287
Name:  ? Sobic.007G027900 Secondary Identifier:  ? PAC:37934134
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G027900 0.5kb upstream 0.5kb upstream 6106 true Chr07: 2525538-2531643 Sorghum bicolor
Sobic.007G027900 0.5kb upstream 0.5kb upstream 500 false Chr07: 2531144-2531643 Sorghum bicolor
Sobic.007G027900 0.5kb downstream 0.5kb downstream 6106 true Chr07: 2525038-2531143 Sorghum bicolor
Sobic.007G027900 0.5kb downstream 0.5kb downstream 500 false Chr07: 2525038-2525537 Sorghum bicolor
Sobic.007G027900 1.0kb upstream 1.0kb upstream 6606 true Chr07: 2525538-2532143 Sorghum bicolor
Sobic.007G027900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2531144-2532143 Sorghum bicolor
Sobic.007G027900 1.0kb downstream 1.0kb downstream 6606 true Chr07: 2524538-2531143 Sorghum bicolor
Sobic.007G027900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2524538-2525537 Sorghum bicolor
Sobic.007G027900 2.0kb upstream 2.0kb upstream 7606 true Chr07: 2525538-2533143 Sorghum bicolor
Sobic.007G027900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2531144-2533143 Sorghum bicolor
Sobic.007G027900 2.0kb downstream 2.0kb downstream 7606 true Chr07: 2523538-2531143 Sorghum bicolor
Sobic.007G027900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2523538-2525537 Sorghum bicolor
Sobic.007G027900 5.0kb upstream 5.0kb upstream 10606 true Chr07: 2525538-2536143 Sorghum bicolor
Sobic.007G027900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2531144-2536143 Sorghum bicolor
Sobic.007G027900 5.0kb downstream 5.0kb downstream 10606 true Chr07: 2520538-2531143 Sorghum bicolor
Sobic.007G027900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2520538-2525537 Sorghum bicolor
Sobic.007G027900 10.0kb upstream 10.0kb upstream 15606 true Chr07: 2525538-2541143 Sorghum bicolor
Sobic.007G027900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2531144-2541143 Sorghum bicolor
Sobic.007G027900 10.0kb downstream 10.0kb downstream 15606 true Chr07: 2515538-2531143 Sorghum bicolor
Sobic.007G027900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2515538-2525537 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178823 5267 Panicoideae View MSA
124570560 5269 Grass View MSA
122048183 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low  
cufflinks 0.005     Low Low
cufflinks 0.01     Low Low
cufflinks 0.012     Low Low
cufflinks 3.5       High
cufflinks 0.094     Low  
cufflinks 2.079        
cufflinks 0.059     Low  
cufflinks 0.048     Low  
cufflinks 0.217        
cufflinks 1.202        
cufflinks 0.939        
cufflinks 0.157        
cufflinks 1.027        
cufflinks 0.6        
cufflinks 0.004     Low Low
cufflinks 1.984        
cufflinks 2.273        
cufflinks 0.047     Low  
cufflinks 1.308        
cufflinks 9.603       High
cufflinks 1.057        
cufflinks 1.088        
cufflinks 1.214        
cufflinks 0.008     Low Low
cufflinks 0.001     Low Low
cufflinks 0.361        
cufflinks 0.075        
cufflinks 0.056     Low  
cufflinks 0.91        

0 Strain