Gene : Sobic.007G026200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33372//PTHR33372:SF1 - FAMILY NOT NAMED // CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  270
Name:  ? Sobic.007G026200 Secondary Identifier:  ? PAC:37934290
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G026200 0.5kb upstream 0.5kb upstream 5172 true Chr07: 2404024-2409195 Sorghum bicolor
Sobic.007G026200 0.5kb upstream 0.5kb upstream 500 false Chr07: 2408696-2409195 Sorghum bicolor
Sobic.007G026200 0.5kb downstream 0.5kb downstream 5172 true Chr07: 2403524-2408695 Sorghum bicolor
Sobic.007G026200 0.5kb downstream 0.5kb downstream 500 false Chr07: 2403524-2404023 Sorghum bicolor
Sobic.007G026200 1.0kb upstream 1.0kb upstream 5672 true Chr07: 2404024-2409695 Sorghum bicolor
Sobic.007G026200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2408696-2409695 Sorghum bicolor
Sobic.007G026200 1.0kb downstream 1.0kb downstream 5672 true Chr07: 2403024-2408695 Sorghum bicolor
Sobic.007G026200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2403024-2404023 Sorghum bicolor
Sobic.007G026200 2.0kb upstream 2.0kb upstream 6672 true Chr07: 2404024-2410695 Sorghum bicolor
Sobic.007G026200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2408696-2410695 Sorghum bicolor
Sobic.007G026200 2.0kb downstream 2.0kb downstream 6672 true Chr07: 2402024-2408695 Sorghum bicolor
Sobic.007G026200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2402024-2404023 Sorghum bicolor
Sobic.007G026200 5.0kb upstream 5.0kb upstream 9672 true Chr07: 2404024-2413695 Sorghum bicolor
Sobic.007G026200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2408696-2413695 Sorghum bicolor
Sobic.007G026200 5.0kb downstream 5.0kb downstream 9672 true Chr07: 2399024-2408695 Sorghum bicolor
Sobic.007G026200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2399024-2404023 Sorghum bicolor
Sobic.007G026200 10.0kb upstream 10.0kb upstream 14672 true Chr07: 2404024-2418695 Sorghum bicolor
Sobic.007G026200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2408696-2418695 Sorghum bicolor
Sobic.007G026200 10.0kb downstream 10.0kb downstream 14672 true Chr07: 2394024-2408695 Sorghum bicolor
Sobic.007G026200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2394024-2404023 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184126 5267 Panicoideae View MSA
124588818 5269 Grass View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.138       High
cufflinks 0.417       Low
cufflinks 2.683        
cufflinks 4.113        
cufflinks 3.916        
cufflinks 4.189        
cufflinks 6.448        
cufflinks 3.776        
cufflinks 4.283        
cufflinks 4.077        
cufflinks 3.135        
cufflinks 2.524        
cufflinks 2.633        
cufflinks 3.084        
cufflinks 3.185        
cufflinks 0.931       Low
cufflinks 7.014        
cufflinks 8.225       High
cufflinks 1.567       Low
cufflinks 3.834        
cufflinks 6.06        
cufflinks 3.918        
cufflinks 3.707        
cufflinks 3.909        
cufflinks 0.445       Low
cufflinks 0.312       Low
cufflinks 3.375        
cufflinks 6.589        
cufflinks 17.941     High High
cufflinks 4.679        

0 Strain