Gene : Sobic.007G089500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR19957//PTHR19957:SF94 - SYNTAXIN // SUBFAMILY NOT NAMED Genomic Order:  923
Name:  ? Sobic.007G089500 Secondary Identifier:  ? PAC:37934434
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G089500 0.5kb upstream 0.5kb upstream 6226 true Chr07: 12620646-12626871 Sorghum bicolor
Sobic.007G089500 0.5kb upstream 0.5kb upstream 500 false Chr07: 12626372-12626871 Sorghum bicolor
Sobic.007G089500 0.5kb downstream 0.5kb downstream 6226 true Chr07: 12620146-12626371 Sorghum bicolor
Sobic.007G089500 0.5kb downstream 0.5kb downstream 500 false Chr07: 12620146-12620645 Sorghum bicolor
Sobic.007G089500 1.0kb upstream 1.0kb upstream 6726 true Chr07: 12620646-12627371 Sorghum bicolor
Sobic.007G089500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 12626372-12627371 Sorghum bicolor
Sobic.007G089500 1.0kb downstream 1.0kb downstream 6726 true Chr07: 12619646-12626371 Sorghum bicolor
Sobic.007G089500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 12619646-12620645 Sorghum bicolor
Sobic.007G089500 2.0kb upstream 2.0kb upstream 7726 true Chr07: 12620646-12628371 Sorghum bicolor
Sobic.007G089500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 12626372-12628371 Sorghum bicolor
Sobic.007G089500 2.0kb downstream 2.0kb downstream 7726 true Chr07: 12618646-12626371 Sorghum bicolor
Sobic.007G089500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 12618646-12620645 Sorghum bicolor
Sobic.007G089500 5.0kb upstream 5.0kb upstream 10726 true Chr07: 12620646-12631371 Sorghum bicolor
Sobic.007G089500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 12626372-12631371 Sorghum bicolor
Sobic.007G089500 5.0kb downstream 5.0kb downstream 10726 true Chr07: 12615646-12626371 Sorghum bicolor
Sobic.007G089500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 12615646-12620645 Sorghum bicolor
Sobic.007G089500 10.0kb upstream 10.0kb upstream 15726 true Chr07: 12620646-12636371 Sorghum bicolor
Sobic.007G089500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 12626372-12636371 Sorghum bicolor
Sobic.007G089500 10.0kb downstream 10.0kb downstream 15726 true Chr07: 12610646-12626371 Sorghum bicolor
Sobic.007G089500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 12610646-12620645 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178238 5267 Panicoideae View MSA
124576770 5269 Grass View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.513        
cufflinks 13.363     High  
cufflinks 3.579       Low
cufflinks 2.582       Low
cufflinks 3.465       Low
cufflinks 13.227        
cufflinks 15.739     High High
cufflinks 12.185     High  
cufflinks 9.536        
cufflinks 9.521        
cufflinks 6.989        
cufflinks 13.4     High  
cufflinks 9.487        
cufflinks 12.948     High  
cufflinks 5.726        
cufflinks 10.587     High  
cufflinks 16.616     High High
cufflinks 17.065     High High
cufflinks 5.878        
cufflinks 17.06     High High
cufflinks 7.291        
cufflinks 12.244     High  
cufflinks 14.117     High  
cufflinks 14.054     High  
cufflinks 10.46     High  
cufflinks 12.666     High  
cufflinks 2.935       Low
cufflinks 7.358        
cufflinks 15.778     High High
cufflinks 6.083        

0 Strain