Gene : Sobic.007G087000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11122//PTHR11122:SF20 - APOSPORY-ASSOCIATED PROTEIN C-RELATED // SUBFAMILY NOT NAMED Genomic Order:  900
Name:  ? Sobic.007G087000 Secondary Identifier:  ? PAC:37935144
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G087000 0.5kb upstream 0.5kb upstream 6211 true Chr07: 11705674-11711884 Sorghum bicolor
Sobic.007G087000 0.5kb upstream 0.5kb upstream 500 false Chr07: 11711385-11711884 Sorghum bicolor
Sobic.007G087000 0.5kb downstream 0.5kb downstream 6211 true Chr07: 11705174-11711384 Sorghum bicolor
Sobic.007G087000 0.5kb downstream 0.5kb downstream 500 false Chr07: 11705174-11705673 Sorghum bicolor
Sobic.007G087000 1.0kb upstream 1.0kb upstream 6711 true Chr07: 11705674-11712384 Sorghum bicolor
Sobic.007G087000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11711385-11712384 Sorghum bicolor
Sobic.007G087000 1.0kb downstream 1.0kb downstream 6711 true Chr07: 11704674-11711384 Sorghum bicolor
Sobic.007G087000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11704674-11705673 Sorghum bicolor
Sobic.007G087000 2.0kb upstream 2.0kb upstream 7711 true Chr07: 11705674-11713384 Sorghum bicolor
Sobic.007G087000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11711385-11713384 Sorghum bicolor
Sobic.007G087000 2.0kb downstream 2.0kb downstream 7711 true Chr07: 11703674-11711384 Sorghum bicolor
Sobic.007G087000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11703674-11705673 Sorghum bicolor
Sobic.007G087000 5.0kb upstream 5.0kb upstream 10711 true Chr07: 11705674-11716384 Sorghum bicolor
Sobic.007G087000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11711385-11716384 Sorghum bicolor
Sobic.007G087000 5.0kb downstream 5.0kb downstream 10711 true Chr07: 11700674-11711384 Sorghum bicolor
Sobic.007G087000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11700674-11705673 Sorghum bicolor
Sobic.007G087000 10.0kb upstream 10.0kb upstream 15711 true Chr07: 11705674-11721384 Sorghum bicolor
Sobic.007G087000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11711385-11721384 Sorghum bicolor
Sobic.007G087000 10.0kb downstream 10.0kb downstream 15711 true Chr07: 11695674-11711384 Sorghum bicolor
Sobic.007G087000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11695674-11705673 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185738 5267 Panicoideae View MSA
124573130 5269 Grass View MSA
122047038 5273 Angiosperm View MSA
121347358 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.983       Low
cufflinks 7.184     High Low
cufflinks 11.206     High  
cufflinks 18.853     High High
cufflinks 14.255     High  
cufflinks 19.623     High High
cufflinks 9.025       Low
cufflinks 8.128       Low
cufflinks 24.327     High High
cufflinks 27.594     High High
cufflinks 13.857     High  
cufflinks 12.312     High  
cufflinks 16.071     High  
cufflinks 10.143        
cufflinks 19.288     High High
cufflinks 13.161     High  
cufflinks 10.041        
cufflinks 10.006        
cufflinks 15.99     High  
cufflinks 14.985     High  
cufflinks 15.62     High  
cufflinks 12.809     High  
cufflinks 11.326     High  
cufflinks 9.88        
cufflinks 11.101     High  
cufflinks 6.735     High Low
cufflinks 13.343     High  
cufflinks 11.211     High  
cufflinks 9.525        
cufflinks 18.896     High High

0 Strain