Gene : Sobic.007G088300 S. bicolor v3.1.1
Defline:  (1 of 5) PF03760 - Late embryogenesis abundant (LEA) group 1 (LEA_1) Genomic Order:  913
Name:  ? Sobic.007G088300 Secondary Identifier:  ? PAC:37936550
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G088300 0.5kb upstream 0.5kb upstream 1936 true Chr07: 12259928-12261863 Sorghum bicolor
Sobic.007G088300 0.5kb upstream 0.5kb upstream 500 false Chr07: 12261364-12261863 Sorghum bicolor
Sobic.007G088300 0.5kb downstream 0.5kb downstream 1936 true Chr07: 12259428-12261363 Sorghum bicolor
Sobic.007G088300 0.5kb downstream 0.5kb downstream 500 false Chr07: 12259428-12259927 Sorghum bicolor
Sobic.007G088300 1.0kb upstream 1.0kb upstream 2436 true Chr07: 12259928-12262363 Sorghum bicolor
Sobic.007G088300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 12261364-12262363 Sorghum bicolor
Sobic.007G088300 1.0kb downstream 1.0kb downstream 2436 true Chr07: 12258928-12261363 Sorghum bicolor
Sobic.007G088300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 12258928-12259927 Sorghum bicolor
Sobic.007G088300 2.0kb upstream 2.0kb upstream 3436 true Chr07: 12259928-12263363 Sorghum bicolor
Sobic.007G088300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 12261364-12263363 Sorghum bicolor
Sobic.007G088300 2.0kb downstream 2.0kb downstream 3436 true Chr07: 12257928-12261363 Sorghum bicolor
Sobic.007G088300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 12257928-12259927 Sorghum bicolor
Sobic.007G088300 5.0kb upstream 5.0kb upstream 6436 true Chr07: 12259928-12266363 Sorghum bicolor
Sobic.007G088300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 12261364-12266363 Sorghum bicolor
Sobic.007G088300 5.0kb downstream 5.0kb downstream 6436 true Chr07: 12254928-12261363 Sorghum bicolor
Sobic.007G088300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 12254928-12259927 Sorghum bicolor
Sobic.007G088300 10.0kb upstream 10.0kb upstream 11436 true Chr07: 12259928-12271363 Sorghum bicolor
Sobic.007G088300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 12261364-12271363 Sorghum bicolor
Sobic.007G088300 10.0kb downstream 10.0kb downstream 11436 true Chr07: 12249928-12261363 Sorghum bicolor
Sobic.007G088300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 12249928-12259927 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180263 5267 Panicoideae View MSA
124584366 5269 Grass View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.135       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 0.041     Low  
cufflinks 0.037     Low  
cufflinks 0.079     Low  
cufflinks 0.094     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.323        
cufflinks 149.805     High High
cufflinks 0.057     Low  
cufflinks 0.082     Low  

0 Strain