Gene : Sobic.007G077900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12706:SF13 - RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  813
Name:  ? Sobic.007G077900 Secondary Identifier:  ? PAC:37937227
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G077900 0.5kb upstream 0.5kb upstream 17553 true Chr07: 9104676-9122228 Sorghum bicolor
Sobic.007G077900 0.5kb upstream 0.5kb upstream 500 false Chr07: 9104676-9105175 Sorghum bicolor
Sobic.007G077900 0.5kb downstream 0.5kb downstream 17553 true Chr07: 9105176-9122728 Sorghum bicolor
Sobic.007G077900 0.5kb downstream 0.5kb downstream 500 false Chr07: 9122229-9122728 Sorghum bicolor
Sobic.007G077900 1.0kb upstream 1.0kb upstream 18053 true Chr07: 9104176-9122228 Sorghum bicolor
Sobic.007G077900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9104176-9105175 Sorghum bicolor
Sobic.007G077900 1.0kb downstream 1.0kb downstream 18053 true Chr07: 9105176-9123228 Sorghum bicolor
Sobic.007G077900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9122229-9123228 Sorghum bicolor
Sobic.007G077900 2.0kb upstream 2.0kb upstream 19053 true Chr07: 9103176-9122228 Sorghum bicolor
Sobic.007G077900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9103176-9105175 Sorghum bicolor
Sobic.007G077900 2.0kb downstream 2.0kb downstream 19053 true Chr07: 9105176-9124228 Sorghum bicolor
Sobic.007G077900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9122229-9124228 Sorghum bicolor
Sobic.007G077900 5.0kb upstream 5.0kb upstream 22053 true Chr07: 9100176-9122228 Sorghum bicolor
Sobic.007G077900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9100176-9105175 Sorghum bicolor
Sobic.007G077900 5.0kb downstream 5.0kb downstream 22053 true Chr07: 9105176-9127228 Sorghum bicolor
Sobic.007G077900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9122229-9127228 Sorghum bicolor
Sobic.007G077900 10.0kb upstream 10.0kb upstream 27053 true Chr07: 9095176-9122228 Sorghum bicolor
Sobic.007G077900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9095176-9105175 Sorghum bicolor
Sobic.007G077900 10.0kb downstream 10.0kb downstream 27053 true Chr07: 9105176-9132228 Sorghum bicolor
Sobic.007G077900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9122229-9132228 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193951 5267 Panicoideae View MSA
124585427 5269 Grass View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.259       Low
cufflinks 0.129       Low
cufflinks 0.327       Low
cufflinks 0.721        
cufflinks 2.649       High
cufflinks 0.711        
cufflinks 1.059        
cufflinks 0.394       Low
cufflinks 1.451        
cufflinks 1.467        
cufflinks 1.166        
cufflinks 1.538        
cufflinks 1.319        
cufflinks 1.226        
cufflinks 1.18        
cufflinks 0.252       Low
cufflinks 0.937        
cufflinks 1.038        
cufflinks 0.407       Low
cufflinks 0.958        
cufflinks 3.416       High
cufflinks 1.189        
cufflinks 1.288        
cufflinks 1.273        
cufflinks 0.392       Low
cufflinks 0.193       Low
cufflinks 1.371        
cufflinks 0.466        
cufflinks 0.912        
cufflinks 1.698        

0 Strain