Gene : Sobic.007G061600 S. bicolor v3.1.1
Genomic Order:  642 Name:  ? Sobic.007G061600
Secondary Identifier:  ? PAC:37936638
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G061600 0.5kb upstream 0.5kb upstream 3542 true Chr07: 6450866-6454407 Sorghum bicolor
Sobic.007G061600 0.5kb upstream 0.5kb upstream 500 false Chr07: 6450866-6451365 Sorghum bicolor
Sobic.007G061600 0.5kb downstream 0.5kb downstream 3542 true Chr07: 6451366-6454907 Sorghum bicolor
Sobic.007G061600 0.5kb downstream 0.5kb downstream 500 false Chr07: 6454408-6454907 Sorghum bicolor
Sobic.007G061600 1.0kb upstream 1.0kb upstream 4042 true Chr07: 6450366-6454407 Sorghum bicolor
Sobic.007G061600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6450366-6451365 Sorghum bicolor
Sobic.007G061600 1.0kb downstream 1.0kb downstream 4042 true Chr07: 6451366-6455407 Sorghum bicolor
Sobic.007G061600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6454408-6455407 Sorghum bicolor
Sobic.007G061600 2.0kb upstream 2.0kb upstream 5042 true Chr07: 6449366-6454407 Sorghum bicolor
Sobic.007G061600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6449366-6451365 Sorghum bicolor
Sobic.007G061600 2.0kb downstream 2.0kb downstream 5042 true Chr07: 6451366-6456407 Sorghum bicolor
Sobic.007G061600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6454408-6456407 Sorghum bicolor
Sobic.007G061600 5.0kb upstream 5.0kb upstream 8042 true Chr07: 6446366-6454407 Sorghum bicolor
Sobic.007G061600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6446366-6451365 Sorghum bicolor
Sobic.007G061600 5.0kb downstream 5.0kb downstream 8042 true Chr07: 6451366-6459407 Sorghum bicolor
Sobic.007G061600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6454408-6459407 Sorghum bicolor
Sobic.007G061600 10.0kb upstream 10.0kb upstream 13042 true Chr07: 6441366-6454407 Sorghum bicolor
Sobic.007G061600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6441366-6451365 Sorghum bicolor
Sobic.007G061600 10.0kb downstream 10.0kb downstream 13042 true Chr07: 6451366-6464407 Sorghum bicolor
Sobic.007G061600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6454408-6464407 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026723 5273 Angiosperm View MSA
122196622 5267 Panicoideae View MSA
124581255 5269 Grass View MSA
121296505 5274 Embryophyte View MSA
123334655 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.048        
cufflinks 0.008     Low  
cufflinks 0.007     Low Low
cufflinks 0.006     Low Low
cufflinks 0.158        
cufflinks 0.015     Low  
cufflinks 0.126        
cufflinks 0.032     Low  
cufflinks 0.003     Low Low
cufflinks 0.005     Low Low
cufflinks 3.826       High
cufflinks 3.576       High
cufflinks 0.005     Low Low
cufflinks 2.866       High
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075     Low  
cufflinks 0.062     Low  
cufflinks 0.008     Low  
cufflinks 0.096     Low  
cufflinks 0.016     Low  
cufflinks 3.244       High
cufflinks 4.719       High
cufflinks 4.726       High
cufflinks 0.01     Low  
cufflinks 0.027     Low  
cufflinks 0.184        
cufflinks 0.011     Low  
cufflinks 0.021     Low  
cufflinks 0.01     Low  

0 Strain