Gene : Sobic.007G059100 S. bicolor v3.1.1
Defline:  (1 of 4) 2.1.1.146 - (Iso)eugenol O-methyltransferase Genomic Order:  616
Name:  ? Sobic.007G059100 Secondary Identifier:  ? PAC:37936773
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-4201 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G059100 0.5kb upstream 0.5kb upstream 4847 true Chr07: 6171780-6176626 Sorghum bicolor
Sobic.007G059100 0.5kb upstream 0.5kb upstream 500 false Chr07: 6176127-6176626 Sorghum bicolor
Sobic.007G059100 0.5kb downstream 0.5kb downstream 4847 true Chr07: 6171280-6176126 Sorghum bicolor
Sobic.007G059100 0.5kb downstream 0.5kb downstream 500 false Chr07: 6171280-6171779 Sorghum bicolor
Sobic.007G059100 1.0kb upstream 1.0kb upstream 5347 true Chr07: 6171780-6177126 Sorghum bicolor
Sobic.007G059100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6176127-6177126 Sorghum bicolor
Sobic.007G059100 1.0kb downstream 1.0kb downstream 5347 true Chr07: 6170780-6176126 Sorghum bicolor
Sobic.007G059100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6170780-6171779 Sorghum bicolor
Sobic.007G059100 2.0kb upstream 2.0kb upstream 6347 true Chr07: 6171780-6178126 Sorghum bicolor
Sobic.007G059100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6176127-6178126 Sorghum bicolor
Sobic.007G059100 2.0kb downstream 2.0kb downstream 6347 true Chr07: 6169780-6176126 Sorghum bicolor
Sobic.007G059100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6169780-6171779 Sorghum bicolor
Sobic.007G059100 5.0kb upstream 5.0kb upstream 9347 true Chr07: 6171780-6181126 Sorghum bicolor
Sobic.007G059100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6176127-6181126 Sorghum bicolor
Sobic.007G059100 5.0kb downstream 5.0kb downstream 9347 true Chr07: 6166780-6176126 Sorghum bicolor
Sobic.007G059100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6166780-6171779 Sorghum bicolor
Sobic.007G059100 10.0kb upstream 10.0kb upstream 14347 true Chr07: 6171780-6186126 Sorghum bicolor
Sobic.007G059100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6176127-6186126 Sorghum bicolor
Sobic.007G059100 10.0kb downstream 10.0kb downstream 14347 true Chr07: 6161780-6176126 Sorghum bicolor
Sobic.007G059100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6161780-6171779 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029927 5273 Angiosperm View MSA
122147595 5267 Panicoideae View MSA
124440290 5269 Grass View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.04     Low  
cufflinks 0.222        
cufflinks 10.649     High High
cufflinks 51.385     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.401       High
cufflinks 0.521        
cufflinks 0.178        
cufflinks 0.012     Low Low
cufflinks 0.014     Low Low
cufflinks 0.035     Low  
cufflinks 0.096     Low  
cufflinks 0.006     Low Low
cufflinks 0.441        
cufflinks 0.021     Low  
cufflinks 3.333       High
cufflinks 0.517        
cufflinks 0.253        
cufflinks 0.993        
cufflinks 0.441        
cufflinks 0.006     Low Low
cufflinks 0.01     Low Low
cufflinks 0.133        
cufflinks 0.048     Low  
cufflinks 3.429       High
cufflinks 0.796        
cufflinks 0.374        
cufflinks 0.005     Low Low
cufflinks 0.103        
cufflinks 0.12        

0 Strain