Gene : Sobic.007G115900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10627//PTHR10627:SF43 - SCP160 // SUBFAMILY NOT NAMED Genomic Order:  1216
Name:  ? Sobic.007G115900 Secondary Identifier:  ? PAC:37934444
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G115900 0.5kb upstream 0.5kb upstream 7052 true Chr07: 50142261-50149312 Sorghum bicolor
Sobic.007G115900 0.5kb upstream 0.5kb upstream 500 false Chr07: 50148813-50149312 Sorghum bicolor
Sobic.007G115900 0.5kb downstream 0.5kb downstream 7052 true Chr07: 50141761-50148812 Sorghum bicolor
Sobic.007G115900 0.5kb downstream 0.5kb downstream 500 false Chr07: 50141761-50142260 Sorghum bicolor
Sobic.007G115900 1.0kb upstream 1.0kb upstream 7552 true Chr07: 50142261-50149812 Sorghum bicolor
Sobic.007G115900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50148813-50149812 Sorghum bicolor
Sobic.007G115900 1.0kb downstream 1.0kb downstream 7552 true Chr07: 50141261-50148812 Sorghum bicolor
Sobic.007G115900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50141261-50142260 Sorghum bicolor
Sobic.007G115900 2.0kb upstream 2.0kb upstream 8552 true Chr07: 50142261-50150812 Sorghum bicolor
Sobic.007G115900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50148813-50150812 Sorghum bicolor
Sobic.007G115900 2.0kb downstream 2.0kb downstream 8552 true Chr07: 50140261-50148812 Sorghum bicolor
Sobic.007G115900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50140261-50142260 Sorghum bicolor
Sobic.007G115900 5.0kb upstream 5.0kb upstream 11552 true Chr07: 50142261-50153812 Sorghum bicolor
Sobic.007G115900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50148813-50153812 Sorghum bicolor
Sobic.007G115900 5.0kb downstream 5.0kb downstream 11552 true Chr07: 50137261-50148812 Sorghum bicolor
Sobic.007G115900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50137261-50142260 Sorghum bicolor
Sobic.007G115900 10.0kb upstream 10.0kb upstream 16552 true Chr07: 50142261-50158812 Sorghum bicolor
Sobic.007G115900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50148813-50158812 Sorghum bicolor
Sobic.007G115900 10.0kb downstream 10.0kb downstream 16552 true Chr07: 50132261-50148812 Sorghum bicolor
Sobic.007G115900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50132261-50142260 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196355 5267 Panicoideae View MSA
124576199 5269 Grass View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.247       High
cufflinks 0.126       Low
cufflinks 0.257       Low
cufflinks 0.578        
cufflinks 0.745        
cufflinks 0.863       High
cufflinks 0.447        
cufflinks 0.134       Low
cufflinks 0.848       High
cufflinks 0.683        
cufflinks 0.421        
cufflinks 0.602        
cufflinks 0.6        
cufflinks 0.499        
cufflinks 0.496        
cufflinks 0.303        
cufflinks 0.479        
cufflinks 0.499        
cufflinks 0.48        
cufflinks 0.684        
cufflinks 1.022       High
cufflinks 0.585        
cufflinks 0.522        
cufflinks 0.543        
cufflinks 0.206       Low
cufflinks 0.09       Low
cufflinks 0.4        
cufflinks 0.512        
cufflinks 0.339        
cufflinks 0.453        

0 Strain