Gene : Sobic.007G108900 S. bicolor v3.1.1
Defline:  (1 of 1) PF11016 - Protein of unknown function (DUF2854) (DUF2854) Genomic Order:  1142
Name:  ? Sobic.007G108900 Secondary Identifier:  ? PAC:37936148
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G108900 0.5kb upstream 0.5kb upstream 5312 true Chr07: 39097296-39102607 Sorghum bicolor
Sobic.007G108900 0.5kb upstream 0.5kb upstream 500 false Chr07: 39102108-39102607 Sorghum bicolor
Sobic.007G108900 0.5kb downstream 0.5kb downstream 5312 true Chr07: 39096796-39102107 Sorghum bicolor
Sobic.007G108900 0.5kb downstream 0.5kb downstream 500 false Chr07: 39096796-39097295 Sorghum bicolor
Sobic.007G108900 1.0kb upstream 1.0kb upstream 5812 true Chr07: 39097296-39103107 Sorghum bicolor
Sobic.007G108900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39102108-39103107 Sorghum bicolor
Sobic.007G108900 1.0kb downstream 1.0kb downstream 5812 true Chr07: 39096296-39102107 Sorghum bicolor
Sobic.007G108900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39096296-39097295 Sorghum bicolor
Sobic.007G108900 2.0kb upstream 2.0kb upstream 6812 true Chr07: 39097296-39104107 Sorghum bicolor
Sobic.007G108900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39102108-39104107 Sorghum bicolor
Sobic.007G108900 2.0kb downstream 2.0kb downstream 6812 true Chr07: 39095296-39102107 Sorghum bicolor
Sobic.007G108900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39095296-39097295 Sorghum bicolor
Sobic.007G108900 5.0kb upstream 5.0kb upstream 9812 true Chr07: 39097296-39107107 Sorghum bicolor
Sobic.007G108900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39102108-39107107 Sorghum bicolor
Sobic.007G108900 5.0kb downstream 5.0kb downstream 9812 true Chr07: 39092296-39102107 Sorghum bicolor
Sobic.007G108900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39092296-39097295 Sorghum bicolor
Sobic.007G108900 10.0kb upstream 10.0kb upstream 14812 true Chr07: 39097296-39112107 Sorghum bicolor
Sobic.007G108900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39102108-39112107 Sorghum bicolor
Sobic.007G108900 10.0kb downstream 10.0kb downstream 14812 true Chr07: 39087296-39102107 Sorghum bicolor
Sobic.007G108900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39087296-39097295 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189997 5267 Panicoideae View MSA
124585261 5269 Grass View MSA
122043202 5273 Angiosperm View MSA
121344662 5274 Embryophyte View MSA
123425067 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.619       Low
cufflinks 88.428     High High
cufflinks 54.101     High High
cufflinks 39.669     High High
cufflinks 4.171        
cufflinks 39.652     High High
cufflinks 24.479     High  
cufflinks 40.299     High High
cufflinks 4.281        
cufflinks 5.445        
cufflinks 1.091       Low
cufflinks 1.031       Low
cufflinks 7.823        
cufflinks 0.62       Low
cufflinks 13.663     High  
cufflinks 63.727     High High
cufflinks 23.567     High  
cufflinks 27.559     High  
cufflinks 37.419     High High
cufflinks 24.862     High  
cufflinks 2.969        
cufflinks 1.361        
cufflinks 0.765       Low
cufflinks 0.917       Low
cufflinks 50.239     High High
cufflinks 64.717     High High
cufflinks 1.321       Low
cufflinks 1.256       Low
cufflinks 25.748     High  
cufflinks 9.438        

0 Strain