Gene : Sobic.007G097400 S. bicolor v3.1.1
Defline:  (1 of 1) K14721 - DNA-directed RNA polymerase III subunit RPC5 (RPC5, POLR3E) Genomic Order:  1027
Name:  ? Sobic.007G097400 Secondary Identifier:  ? PAC:37935913
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G097400 0.5kb upstream 0.5kb upstream 32439 true Chr07: 19037282-19069720 Sorghum bicolor
Sobic.007G097400 0.5kb upstream 0.5kb upstream 500 false Chr07: 19037282-19037781 Sorghum bicolor
Sobic.007G097400 0.5kb downstream 0.5kb downstream 32439 true Chr07: 19037782-19070220 Sorghum bicolor
Sobic.007G097400 0.5kb downstream 0.5kb downstream 500 false Chr07: 19069721-19070220 Sorghum bicolor
Sobic.007G097400 1.0kb upstream 1.0kb upstream 32939 true Chr07: 19036782-19069720 Sorghum bicolor
Sobic.007G097400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19036782-19037781 Sorghum bicolor
Sobic.007G097400 1.0kb downstream 1.0kb downstream 32939 true Chr07: 19037782-19070720 Sorghum bicolor
Sobic.007G097400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19069721-19070720 Sorghum bicolor
Sobic.007G097400 2.0kb upstream 2.0kb upstream 33939 true Chr07: 19035782-19069720 Sorghum bicolor
Sobic.007G097400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19035782-19037781 Sorghum bicolor
Sobic.007G097400 2.0kb downstream 2.0kb downstream 33939 true Chr07: 19037782-19071720 Sorghum bicolor
Sobic.007G097400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19069721-19071720 Sorghum bicolor
Sobic.007G097400 5.0kb upstream 5.0kb upstream 36939 true Chr07: 19032782-19069720 Sorghum bicolor
Sobic.007G097400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19032782-19037781 Sorghum bicolor
Sobic.007G097400 5.0kb downstream 5.0kb downstream 36939 true Chr07: 19037782-19074720 Sorghum bicolor
Sobic.007G097400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19069721-19074720 Sorghum bicolor
Sobic.007G097400 10.0kb upstream 10.0kb upstream 41939 true Chr07: 19027782-19069720 Sorghum bicolor
Sobic.007G097400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19027782-19037781 Sorghum bicolor
Sobic.007G097400 10.0kb downstream 10.0kb downstream 41939 true Chr07: 19037782-19079720 Sorghum bicolor
Sobic.007G097400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19069721-19079720 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182819 5267 Panicoideae View MSA
124580329 5269 Grass View MSA
122041798 5273 Angiosperm View MSA
123429138 5275 Viridiplantae View MSA
121344108 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.226        
cufflinks 0.021     Low Low
cufflinks 0.075        
cufflinks 0.121        
cufflinks 0.348       High
cufflinks 0.149        
cufflinks 0.094     Low  
cufflinks 0.023     Low Low
cufflinks 0.289       High
cufflinks 0.271       High
cufflinks 0.157        
cufflinks 0.137        
cufflinks 0.215        
cufflinks 0.113        
cufflinks 0.204        
cufflinks 0.044     Low Low
cufflinks 0.083     Low  
cufflinks 0.096        
cufflinks 0.056     Low  
cufflinks 0.093     Low  
cufflinks 0.465       High
cufflinks 0.124        
cufflinks 0.128        
cufflinks 0.118        
cufflinks 0.046     Low Low
cufflinks 0.014     Low Low
cufflinks 0.159        
cufflinks 0.104        
cufflinks 0.079     Low  
cufflinks 0.26       High

0 Strain