Gene : Sobic.007G094400 S. bicolor v3.1.1
Defline:  (1 of 22) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  997
Name:  ? Sobic.007G094400 Secondary Identifier:  ? PAC:37936286
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G094400 0.5kb upstream 0.5kb upstream 10785 true Chr07: 17226288-17237072 Sorghum bicolor
Sobic.007G094400 0.5kb upstream 0.5kb upstream 500 false Chr07: 17236573-17237072 Sorghum bicolor
Sobic.007G094400 0.5kb downstream 0.5kb downstream 10785 true Chr07: 17225788-17236572 Sorghum bicolor
Sobic.007G094400 0.5kb downstream 0.5kb downstream 500 false Chr07: 17225788-17226287 Sorghum bicolor
Sobic.007G094400 1.0kb upstream 1.0kb upstream 11285 true Chr07: 17226288-17237572 Sorghum bicolor
Sobic.007G094400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17236573-17237572 Sorghum bicolor
Sobic.007G094400 1.0kb downstream 1.0kb downstream 11285 true Chr07: 17225288-17236572 Sorghum bicolor
Sobic.007G094400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17225288-17226287 Sorghum bicolor
Sobic.007G094400 2.0kb upstream 2.0kb upstream 12285 true Chr07: 17226288-17238572 Sorghum bicolor
Sobic.007G094400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17236573-17238572 Sorghum bicolor
Sobic.007G094400 2.0kb downstream 2.0kb downstream 12285 true Chr07: 17224288-17236572 Sorghum bicolor
Sobic.007G094400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17224288-17226287 Sorghum bicolor
Sobic.007G094400 5.0kb upstream 5.0kb upstream 15285 true Chr07: 17226288-17241572 Sorghum bicolor
Sobic.007G094400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17236573-17241572 Sorghum bicolor
Sobic.007G094400 5.0kb downstream 5.0kb downstream 15285 true Chr07: 17221288-17236572 Sorghum bicolor
Sobic.007G094400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17221288-17226287 Sorghum bicolor
Sobic.007G094400 10.0kb upstream 10.0kb upstream 20285 true Chr07: 17226288-17246572 Sorghum bicolor
Sobic.007G094400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17236573-17246572 Sorghum bicolor
Sobic.007G094400 10.0kb downstream 10.0kb downstream 20285 true Chr07: 17216288-17236572 Sorghum bicolor
Sobic.007G094400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17216288-17226287 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186846 5267 Panicoideae View MSA
124570453 5269 Grass View MSA
122049951 5273 Angiosperm View MSA
121351740 5274 Embryophyte View MSA
123382300 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.036        
cufflinks 0.159       Low
cufflinks 0.38       Low
cufflinks 0.726        
cufflinks 3.871       High
cufflinks 1.611        
cufflinks 1.969        
cufflinks 0.348       Low
cufflinks 2.998        
cufflinks 2.781        
cufflinks 1.443        
cufflinks 1.982        
cufflinks 2.455        
cufflinks 2.004        
cufflinks 1.479        
cufflinks 0.235       Low
cufflinks 1.753        
cufflinks 1.752        
cufflinks 0.6        
cufflinks 1.726        
cufflinks 3.999       High
cufflinks 2.753        
cufflinks 2.153        
cufflinks 2.185        
cufflinks 0.1       Low
cufflinks 0.061       Low
cufflinks 1.285        
cufflinks 2.104        
cufflinks 1.199        
cufflinks 2.331        

0 Strain