Gene : Sobic.007G091301 S. bicolor v3.1.1
Defline:  (1 of 1) PF13975 - gag-polyprotein putative aspartyl protease (gag-asp_proteas) Genomic Order:  968
Name:  ? Sobic.007G091301 Secondary Identifier:  ? PAC:37936107
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G091301 0.5kb upstream 0.5kb upstream 1980 true Chr07: 15051608-15053587 Sorghum bicolor
Sobic.007G091301 0.5kb upstream 0.5kb upstream 500 false Chr07: 15051608-15052107 Sorghum bicolor
Sobic.007G091301 0.5kb downstream 0.5kb downstream 1980 true Chr07: 15052108-15054087 Sorghum bicolor
Sobic.007G091301 0.5kb downstream 0.5kb downstream 500 false Chr07: 15053588-15054087 Sorghum bicolor
Sobic.007G091301 1.0kb upstream 1.0kb upstream 2480 true Chr07: 15051108-15053587 Sorghum bicolor
Sobic.007G091301 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15051108-15052107 Sorghum bicolor
Sobic.007G091301 1.0kb downstream 1.0kb downstream 2480 true Chr07: 15052108-15054587 Sorghum bicolor
Sobic.007G091301 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15053588-15054587 Sorghum bicolor
Sobic.007G091301 2.0kb upstream 2.0kb upstream 3480 true Chr07: 15050108-15053587 Sorghum bicolor
Sobic.007G091301 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15050108-15052107 Sorghum bicolor
Sobic.007G091301 2.0kb downstream 2.0kb downstream 3480 true Chr07: 15052108-15055587 Sorghum bicolor
Sobic.007G091301 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15053588-15055587 Sorghum bicolor
Sobic.007G091301 5.0kb upstream 5.0kb upstream 6480 true Chr07: 15047108-15053587 Sorghum bicolor
Sobic.007G091301 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15047108-15052107 Sorghum bicolor
Sobic.007G091301 5.0kb downstream 5.0kb downstream 6480 true Chr07: 15052108-15058587 Sorghum bicolor
Sobic.007G091301 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15053588-15058587 Sorghum bicolor
Sobic.007G091301 10.0kb upstream 10.0kb upstream 11480 true Chr07: 15042108-15053587 Sorghum bicolor
Sobic.007G091301 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15042108-15052107 Sorghum bicolor
Sobic.007G091301 10.0kb downstream 10.0kb downstream 11480 true Chr07: 15052108-15063587 Sorghum bicolor
Sobic.007G091301 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15053588-15063587 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122196899 5267 Panicoideae View MSA
124591131 5269 Grass View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain