Gene : Sobic.007G090537 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10906//PTHR10906:SF9 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  960
Name:  ? Sobic.007G090537 Secondary Identifier:  ? PAC:37934530
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G090537 0.5kb upstream 0.5kb upstream 9464 true Chr07: 14199576-14209039 Sorghum bicolor
Sobic.007G090537 0.5kb upstream 0.5kb upstream 500 false Chr07: 14208540-14209039 Sorghum bicolor
Sobic.007G090537 0.5kb downstream 0.5kb downstream 9464 true Chr07: 14199076-14208539 Sorghum bicolor
Sobic.007G090537 0.5kb downstream 0.5kb downstream 500 false Chr07: 14199076-14199575 Sorghum bicolor
Sobic.007G090537 1.0kb upstream 1.0kb upstream 9964 true Chr07: 14199576-14209539 Sorghum bicolor
Sobic.007G090537 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14208540-14209539 Sorghum bicolor
Sobic.007G090537 1.0kb downstream 1.0kb downstream 9964 true Chr07: 14198576-14208539 Sorghum bicolor
Sobic.007G090537 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14198576-14199575 Sorghum bicolor
Sobic.007G090537 2.0kb upstream 2.0kb upstream 10964 true Chr07: 14199576-14210539 Sorghum bicolor
Sobic.007G090537 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14208540-14210539 Sorghum bicolor
Sobic.007G090537 2.0kb downstream 2.0kb downstream 10964 true Chr07: 14197576-14208539 Sorghum bicolor
Sobic.007G090537 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14197576-14199575 Sorghum bicolor
Sobic.007G090537 5.0kb upstream 5.0kb upstream 13964 true Chr07: 14199576-14213539 Sorghum bicolor
Sobic.007G090537 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14208540-14213539 Sorghum bicolor
Sobic.007G090537 5.0kb downstream 5.0kb downstream 13964 true Chr07: 14194576-14208539 Sorghum bicolor
Sobic.007G090537 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14194576-14199575 Sorghum bicolor
Sobic.007G090537 10.0kb upstream 10.0kb upstream 18964 true Chr07: 14199576-14218539 Sorghum bicolor
Sobic.007G090537 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14208540-14218539 Sorghum bicolor
Sobic.007G090537 10.0kb downstream 10.0kb downstream 18964 true Chr07: 14189576-14208539 Sorghum bicolor
Sobic.007G090537 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14189576-14199575 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193917 5267 Panicoideae View MSA
124586907 5269 Grass View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58        
cufflinks 2.744        
cufflinks 3.81        
cufflinks 1.514        
cufflinks 2.821        
cufflinks 0.999        
cufflinks 11.023       High
cufflinks 10.615     High High
cufflinks 0.948        
cufflinks 1.248        
cufflinks 1.041        
cufflinks 1.146        
cufflinks 1.105        
cufflinks 1.062        
cufflinks 2.095        
cufflinks 2.913        
cufflinks 11.509     High High
cufflinks 14.305     High High
cufflinks 1.865        
cufflinks 7.16       High
cufflinks 3.401        
cufflinks 1.334        
cufflinks 1.448        
cufflinks 1.444        
cufflinks 2.009        
cufflinks 2.659        
cufflinks 0.803        
cufflinks 0.058     Low Low
cufflinks 22.925     High High
cufflinks 2.883        

0 Strain