Gene : Sobic.007G092400 S. bicolor v3.1.1
Defline:  (1 of 8) PTHR22950:SF235 - LYSINE HISTIDINE TRANSPORTER 1-RELATED Genomic Order:  978
Name:  ? Sobic.007G092400 Secondary Identifier:  ? PAC:37934289
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G092400 0.5kb upstream 0.5kb upstream 4438 true Chr07: 15713135-15717572 Sorghum bicolor
Sobic.007G092400 0.5kb upstream 0.5kb upstream 500 false Chr07: 15713135-15713634 Sorghum bicolor
Sobic.007G092400 0.5kb downstream 0.5kb downstream 4438 true Chr07: 15713635-15718072 Sorghum bicolor
Sobic.007G092400 0.5kb downstream 0.5kb downstream 500 false Chr07: 15717573-15718072 Sorghum bicolor
Sobic.007G092400 1.0kb upstream 1.0kb upstream 4938 true Chr07: 15712635-15717572 Sorghum bicolor
Sobic.007G092400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15712635-15713634 Sorghum bicolor
Sobic.007G092400 1.0kb downstream 1.0kb downstream 4938 true Chr07: 15713635-15718572 Sorghum bicolor
Sobic.007G092400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15717573-15718572 Sorghum bicolor
Sobic.007G092400 2.0kb upstream 2.0kb upstream 5938 true Chr07: 15711635-15717572 Sorghum bicolor
Sobic.007G092400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15711635-15713634 Sorghum bicolor
Sobic.007G092400 2.0kb downstream 2.0kb downstream 5938 true Chr07: 15713635-15719572 Sorghum bicolor
Sobic.007G092400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15717573-15719572 Sorghum bicolor
Sobic.007G092400 5.0kb upstream 5.0kb upstream 8938 true Chr07: 15708635-15717572 Sorghum bicolor
Sobic.007G092400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15708635-15713634 Sorghum bicolor
Sobic.007G092400 5.0kb downstream 5.0kb downstream 8938 true Chr07: 15713635-15722572 Sorghum bicolor
Sobic.007G092400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15717573-15722572 Sorghum bicolor
Sobic.007G092400 10.0kb upstream 10.0kb upstream 13938 true Chr07: 15703635-15717572 Sorghum bicolor
Sobic.007G092400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15703635-15713634 Sorghum bicolor
Sobic.007G092400 10.0kb downstream 10.0kb downstream 13938 true Chr07: 15713635-15727572 Sorghum bicolor
Sobic.007G092400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15717573-15727572 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029224 5273 Angiosperm View MSA
122194688 5267 Panicoideae View MSA
124466780 5269 Grass View MSA
121298587 5274 Embryophyte View MSA
123428146 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.266        
cufflinks 2.67        
cufflinks 15.537     High High
cufflinks 47.561     High High
cufflinks 0.004     Low Low
cufflinks 3.16        
cufflinks 2.292        
cufflinks 0.366        
cufflinks 1.633        
cufflinks 0.67        
cufflinks 2.61        
cufflinks 2.14        
cufflinks 0.082       Low
cufflinks 2.205        
cufflinks 0.747        
cufflinks 11.593     High High
cufflinks 2.849        
cufflinks 1.75        
cufflinks 2.58        
cufflinks 10.304       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.976        
cufflinks 2.276        
cufflinks 2.007        
cufflinks 11.459     High High
cufflinks 1.446        
cufflinks 0.661        
cufflinks 0.451        
cufflinks 0.191        
cufflinks 0.677        

0 Strain