Gene : Sobic.007G143500 S. bicolor v3.1.1

Defline:  (1 of 2) K12832 - splicing factor 3B subunit 5 (SF3B5, SF3B10) Genomic Order:  1514
Name:  ? Sobic.007G143500 Secondary Identifier:  ? PAC:37936151

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G143500 0.5kb upstream 0.5kb upstream 10164 true Chr07: 57321656-57331819 Sorghum bicolor
Sobic.007G143500 0.5kb upstream 0.5kb upstream 500 false Chr07: 57331320-57331819 Sorghum bicolor
Sobic.007G143500 0.5kb downstream 0.5kb downstream 10164 true Chr07: 57321156-57331319 Sorghum bicolor
Sobic.007G143500 0.5kb downstream 0.5kb downstream 500 false Chr07: 57321156-57321655 Sorghum bicolor
Sobic.007G143500 1.0kb upstream 1.0kb upstream 10664 true Chr07: 57321656-57332319 Sorghum bicolor
Sobic.007G143500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 57331320-57332319 Sorghum bicolor
Sobic.007G143500 1.0kb downstream 1.0kb downstream 10664 true Chr07: 57320656-57331319 Sorghum bicolor
Sobic.007G143500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 57320656-57321655 Sorghum bicolor
Sobic.007G143500 2.0kb upstream 2.0kb upstream 11664 true Chr07: 57321656-57333319 Sorghum bicolor
Sobic.007G143500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 57331320-57333319 Sorghum bicolor
Sobic.007G143500 2.0kb downstream 2.0kb downstream 11664 true Chr07: 57319656-57331319 Sorghum bicolor
Sobic.007G143500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 57319656-57321655 Sorghum bicolor
Sobic.007G143500 5.0kb upstream 5.0kb upstream 14664 true Chr07: 57321656-57336319 Sorghum bicolor
Sobic.007G143500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 57331320-57336319 Sorghum bicolor
Sobic.007G143500 5.0kb downstream 5.0kb downstream 14664 true Chr07: 57316656-57331319 Sorghum bicolor
Sobic.007G143500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 57316656-57321655 Sorghum bicolor
Sobic.007G143500 10.0kb upstream 10.0kb upstream 19664 true Chr07: 57321656-57341319 Sorghum bicolor
Sobic.007G143500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 57331320-57341319 Sorghum bicolor
Sobic.007G143500 10.0kb downstream 10.0kb downstream 19664 true Chr07: 57311656-57331319 Sorghum bicolor
Sobic.007G143500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 57311656-57321655 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
122199156 5267 Panicoideae View MSA
124576348 5269 Grass View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.523        
cufflinks 0.123       Low
cufflinks 0.297        
cufflinks 0.53        
cufflinks 0.695       High
cufflinks 0.66       High
cufflinks 0.371        
cufflinks 0.185       Low
cufflinks 0.536        
cufflinks 0.53        
cufflinks 0.235        
cufflinks 0.226        
cufflinks 0.471        
cufflinks 0.272        
cufflinks 0.37        
cufflinks 0.28        
cufflinks 0.39        
cufflinks 0.431        
cufflinks 0.237        
cufflinks 0.52        
cufflinks 0.937       High
cufflinks 0.379        
cufflinks 0.271        
cufflinks 0.256        
cufflinks 0.183       Low
cufflinks 0.093       Low
cufflinks 0.307        
cufflinks 0.923       High
cufflinks 0.39        
cufflinks 0.421        

0 Strain