Gene : Sobic.007G143000 S. bicolor v3.1.1
Defline:  (1 of 3) K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) Genomic Order:  1508
Name:  ? Sobic.007G143000 Secondary Identifier:  ? PAC:37935984
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G143000 0.5kb upstream 0.5kb upstream 3802 true Chr07: 57298008-57301809 Sorghum bicolor
Sobic.007G143000 0.5kb upstream 0.5kb upstream 500 false Chr07: 57298008-57298507 Sorghum bicolor
Sobic.007G143000 0.5kb downstream 0.5kb downstream 3802 true Chr07: 57298508-57302309 Sorghum bicolor
Sobic.007G143000 0.5kb downstream 0.5kb downstream 500 false Chr07: 57301810-57302309 Sorghum bicolor
Sobic.007G143000 1.0kb upstream 1.0kb upstream 4302 true Chr07: 57297508-57301809 Sorghum bicolor
Sobic.007G143000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 57297508-57298507 Sorghum bicolor
Sobic.007G143000 1.0kb downstream 1.0kb downstream 4302 true Chr07: 57298508-57302809 Sorghum bicolor
Sobic.007G143000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 57301810-57302809 Sorghum bicolor
Sobic.007G143000 2.0kb upstream 2.0kb upstream 5302 true Chr07: 57296508-57301809 Sorghum bicolor
Sobic.007G143000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 57296508-57298507 Sorghum bicolor
Sobic.007G143000 2.0kb downstream 2.0kb downstream 5302 true Chr07: 57298508-57303809 Sorghum bicolor
Sobic.007G143000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 57301810-57303809 Sorghum bicolor
Sobic.007G143000 5.0kb upstream 5.0kb upstream 8302 true Chr07: 57293508-57301809 Sorghum bicolor
Sobic.007G143000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 57293508-57298507 Sorghum bicolor
Sobic.007G143000 5.0kb downstream 5.0kb downstream 8302 true Chr07: 57298508-57306809 Sorghum bicolor
Sobic.007G143000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 57301810-57306809 Sorghum bicolor
Sobic.007G143000 10.0kb upstream 10.0kb upstream 13302 true Chr07: 57288508-57301809 Sorghum bicolor
Sobic.007G143000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 57288508-57298507 Sorghum bicolor
Sobic.007G143000 10.0kb downstream 10.0kb downstream 13302 true Chr07: 57298508-57311809 Sorghum bicolor
Sobic.007G143000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 57301810-57311809 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184146 5267 Panicoideae View MSA
124585036 5269 Grass View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.145     High High
cufflinks 0.508       Low
cufflinks 1.304       Low
cufflinks 3.854        
cufflinks 4.262        
cufflinks 3.52        
cufflinks 3.399        
cufflinks 0.659       Low
cufflinks 4.502        
cufflinks 4.807        
cufflinks 5.658        
cufflinks 4.174        
cufflinks 2.554        
cufflinks 5.89        
cufflinks 2.892        
cufflinks 1.19       Low
cufflinks 3.84        
cufflinks 3.188        
cufflinks 0.673       Low
cufflinks 2.839        
cufflinks 6.46        
cufflinks 8.535       High
cufflinks 6.729        
cufflinks 8.183        
cufflinks 0.509       Low
cufflinks 0.474       Low
cufflinks 3.401        
cufflinks 7.414        
cufflinks 2.517        
cufflinks 4.141        

0 Strain