Gene : Sobic.007G142900 S. bicolor v3.1.1
Defline:  (1 of 19) PF00560//PF07714//PF08263//PF13855 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  1507
Name:  ? Sobic.007G142900 Secondary Identifier:  ? PAC:37934769
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G142900 0.5kb upstream 0.5kb upstream 7135 true Chr07: 57287944-57295078 Sorghum bicolor
Sobic.007G142900 0.5kb upstream 0.5kb upstream 500 false Chr07: 57294579-57295078 Sorghum bicolor
Sobic.007G142900 0.5kb downstream 0.5kb downstream 7135 true Chr07: 57287444-57294578 Sorghum bicolor
Sobic.007G142900 0.5kb downstream 0.5kb downstream 500 false Chr07: 57287444-57287943 Sorghum bicolor
Sobic.007G142900 1.0kb upstream 1.0kb upstream 7635 true Chr07: 57287944-57295578 Sorghum bicolor
Sobic.007G142900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 57294579-57295578 Sorghum bicolor
Sobic.007G142900 1.0kb downstream 1.0kb downstream 7635 true Chr07: 57286944-57294578 Sorghum bicolor
Sobic.007G142900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 57286944-57287943 Sorghum bicolor
Sobic.007G142900 2.0kb upstream 2.0kb upstream 8635 true Chr07: 57287944-57296578 Sorghum bicolor
Sobic.007G142900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 57294579-57296578 Sorghum bicolor
Sobic.007G142900 2.0kb downstream 2.0kb downstream 8635 true Chr07: 57285944-57294578 Sorghum bicolor
Sobic.007G142900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 57285944-57287943 Sorghum bicolor
Sobic.007G142900 5.0kb upstream 5.0kb upstream 11635 true Chr07: 57287944-57299578 Sorghum bicolor
Sobic.007G142900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 57294579-57299578 Sorghum bicolor
Sobic.007G142900 5.0kb downstream 5.0kb downstream 11635 true Chr07: 57282944-57294578 Sorghum bicolor
Sobic.007G142900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 57282944-57287943 Sorghum bicolor
Sobic.007G142900 10.0kb upstream 10.0kb upstream 16635 true Chr07: 57287944-57304578 Sorghum bicolor
Sobic.007G142900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 57294579-57304578 Sorghum bicolor
Sobic.007G142900 10.0kb downstream 10.0kb downstream 16635 true Chr07: 57277944-57294578 Sorghum bicolor
Sobic.007G142900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 57277944-57287943 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183366 5267 Panicoideae View MSA
124578964 5269 Grass View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.339       High
cufflinks 0.067        
cufflinks 0.023     Low Low
cufflinks 0.023     Low Low
cufflinks 0.428       High
cufflinks 0.046     Low  
cufflinks 0.24        
cufflinks 0.182        
cufflinks 0.039     Low Low
cufflinks 0.056     Low  
cufflinks 0.104        
cufflinks 0.074     Low  
cufflinks 0.064     Low  
cufflinks 0.062     Low  
cufflinks 0.107        
cufflinks 0.04     Low Low
cufflinks 0.183        
cufflinks 0.202        
cufflinks 0.064     Low  
cufflinks 0.167        
cufflinks 1.291       High
cufflinks 0.128        
cufflinks 0.061     Low  
cufflinks 0.085     Low  
cufflinks 0.091        
cufflinks 0.086        
cufflinks 0.024     Low Low
cufflinks 0.253        
cufflinks 0.183        
cufflinks 0.042     Low  

0 Strain