Gene : Sobic.007G140400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE Genomic Order:  1477
Name:  ? Sobic.007G140400 Secondary Identifier:  ? PAC:37936393
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G140400 0.5kb upstream 0.5kb upstream 5569 true Chr07: 56947121-56952689 Sorghum bicolor
Sobic.007G140400 0.5kb upstream 0.5kb upstream 500 false Chr07: 56947121-56947620 Sorghum bicolor
Sobic.007G140400 0.5kb downstream 0.5kb downstream 5569 true Chr07: 56947621-56953189 Sorghum bicolor
Sobic.007G140400 0.5kb downstream 0.5kb downstream 500 false Chr07: 56952690-56953189 Sorghum bicolor
Sobic.007G140400 1.0kb upstream 1.0kb upstream 6069 true Chr07: 56946621-56952689 Sorghum bicolor
Sobic.007G140400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 56946621-56947620 Sorghum bicolor
Sobic.007G140400 1.0kb downstream 1.0kb downstream 6069 true Chr07: 56947621-56953689 Sorghum bicolor
Sobic.007G140400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 56952690-56953689 Sorghum bicolor
Sobic.007G140400 2.0kb upstream 2.0kb upstream 7069 true Chr07: 56945621-56952689 Sorghum bicolor
Sobic.007G140400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 56945621-56947620 Sorghum bicolor
Sobic.007G140400 2.0kb downstream 2.0kb downstream 7069 true Chr07: 56947621-56954689 Sorghum bicolor
Sobic.007G140400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 56952690-56954689 Sorghum bicolor
Sobic.007G140400 5.0kb upstream 5.0kb upstream 10069 true Chr07: 56942621-56952689 Sorghum bicolor
Sobic.007G140400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 56942621-56947620 Sorghum bicolor
Sobic.007G140400 5.0kb downstream 5.0kb downstream 10069 true Chr07: 56947621-56957689 Sorghum bicolor
Sobic.007G140400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 56952690-56957689 Sorghum bicolor
Sobic.007G140400 10.0kb upstream 10.0kb upstream 15069 true Chr07: 56937621-56952689 Sorghum bicolor
Sobic.007G140400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 56937621-56947620 Sorghum bicolor
Sobic.007G140400 10.0kb downstream 10.0kb downstream 15069 true Chr07: 56947621-56962689 Sorghum bicolor
Sobic.007G140400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 56952690-56962689 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187125 5267 Panicoideae View MSA
124571727 5269 Grass View MSA
122041531 5273 Angiosperm View MSA
121345225 5274 Embryophyte View MSA
123427620 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.4       High
cufflinks 0.205       Low
cufflinks 0.639        
cufflinks 1.084        
cufflinks 0.775        
cufflinks 1.551       High
cufflinks 0.497        
cufflinks 0.265       Low
cufflinks 1.503       High
cufflinks 1.48       High
cufflinks 0.707        
cufflinks 0.876        
cufflinks 0.808        
cufflinks 0.629        
cufflinks 0.723        
cufflinks 0.421       Low
cufflinks 0.618        
cufflinks 0.598        
cufflinks 0.4       Low
cufflinks 0.649        
cufflinks 1.486       High
cufflinks 0.997        
cufflinks 0.767        
cufflinks 0.782        
cufflinks 0.351       Low
cufflinks 0.298       Low
cufflinks 1.006        
cufflinks 0.657        
cufflinks 0.537        
cufflinks 1.036        

0 Strain