Gene : Sobic.007G137350 S. bicolor v3.1.1
Defline:  (1 of 1) K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Genomic Order:  1441
Name:  ? Sobic.007G137350 Secondary Identifier:  ? PAC:37935012
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G137350 0.5kb upstream 0.5kb upstream 3285 true Chr07: 56507783-56511067 Sorghum bicolor
Sobic.007G137350 0.5kb upstream 0.5kb upstream 500 false Chr07: 56507783-56508282 Sorghum bicolor
Sobic.007G137350 0.5kb downstream 0.5kb downstream 3285 true Chr07: 56508283-56511567 Sorghum bicolor
Sobic.007G137350 0.5kb downstream 0.5kb downstream 500 false Chr07: 56511068-56511567 Sorghum bicolor
Sobic.007G137350 1.0kb upstream 1.0kb upstream 3785 true Chr07: 56507283-56511067 Sorghum bicolor
Sobic.007G137350 1.0kb upstream 1.0kb upstream 1000 false Chr07: 56507283-56508282 Sorghum bicolor
Sobic.007G137350 1.0kb downstream 1.0kb downstream 3785 true Chr07: 56508283-56512067 Sorghum bicolor
Sobic.007G137350 1.0kb downstream 1.0kb downstream 1000 false Chr07: 56511068-56512067 Sorghum bicolor
Sobic.007G137350 2.0kb upstream 2.0kb upstream 4785 true Chr07: 56506283-56511067 Sorghum bicolor
Sobic.007G137350 2.0kb upstream 2.0kb upstream 2000 false Chr07: 56506283-56508282 Sorghum bicolor
Sobic.007G137350 2.0kb downstream 2.0kb downstream 4785 true Chr07: 56508283-56513067 Sorghum bicolor
Sobic.007G137350 2.0kb downstream 2.0kb downstream 2000 false Chr07: 56511068-56513067 Sorghum bicolor
Sobic.007G137350 5.0kb upstream 5.0kb upstream 7785 true Chr07: 56503283-56511067 Sorghum bicolor
Sobic.007G137350 5.0kb upstream 5.0kb upstream 5000 false Chr07: 56503283-56508282 Sorghum bicolor
Sobic.007G137350 5.0kb downstream 5.0kb downstream 7785 true Chr07: 56508283-56516067 Sorghum bicolor
Sobic.007G137350 5.0kb downstream 5.0kb downstream 5000 false Chr07: 56511068-56516067 Sorghum bicolor
Sobic.007G137350 10.0kb upstream 10.0kb upstream 12785 true Chr07: 56498283-56511067 Sorghum bicolor
Sobic.007G137350 10.0kb upstream 10.0kb upstream 10000 false Chr07: 56498283-56508282 Sorghum bicolor
Sobic.007G137350 10.0kb downstream 10.0kb downstream 12785 true Chr07: 56508283-56521067 Sorghum bicolor
Sobic.007G137350 10.0kb downstream 10.0kb downstream 10000 false Chr07: 56511068-56521067 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
122187997 5267 Panicoideae View MSA
124579733 5269 Grass View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.476     High High
cufflinks 0.181       Low
cufflinks 0.312       Low
cufflinks 1.383        
cufflinks 4.724        
cufflinks 0.544       Low
cufflinks 2.801        
cufflinks 0.348       Low
cufflinks 4.188        
cufflinks 3.724        
cufflinks 4.378        
cufflinks 5.704        
cufflinks 1.777        
cufflinks 7.619        
cufflinks 2.159        
cufflinks 0.59       Low
cufflinks 3.521        
cufflinks 2.976        
cufflinks 0.543       Low
cufflinks 2.872        
cufflinks 14.053       High
cufflinks 6.745        
cufflinks 7.378        
cufflinks 8.26        
cufflinks 0.2       Low
cufflinks 0.061       Low
cufflinks 2.318        
cufflinks 4.442        
cufflinks 2.275        
cufflinks 4.678        

0 Strain