Gene : Sobic.007G134400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22870//PTHR22870:SF206 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Genomic Order:  1410
Name:  ? Sobic.007G134400 Secondary Identifier:  ? PAC:37934708
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G134400 0.5kb upstream 0.5kb upstream 5172 true Chr07: 55942492-55947663 Sorghum bicolor
Sobic.007G134400 0.5kb upstream 0.5kb upstream 500 false Chr07: 55947164-55947663 Sorghum bicolor
Sobic.007G134400 0.5kb downstream 0.5kb downstream 5172 true Chr07: 55941992-55947163 Sorghum bicolor
Sobic.007G134400 0.5kb downstream 0.5kb downstream 500 false Chr07: 55941992-55942491 Sorghum bicolor
Sobic.007G134400 1.0kb upstream 1.0kb upstream 5672 true Chr07: 55942492-55948163 Sorghum bicolor
Sobic.007G134400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 55947164-55948163 Sorghum bicolor
Sobic.007G134400 1.0kb downstream 1.0kb downstream 5672 true Chr07: 55941492-55947163 Sorghum bicolor
Sobic.007G134400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 55941492-55942491 Sorghum bicolor
Sobic.007G134400 2.0kb upstream 2.0kb upstream 6672 true Chr07: 55942492-55949163 Sorghum bicolor
Sobic.007G134400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 55947164-55949163 Sorghum bicolor
Sobic.007G134400 2.0kb downstream 2.0kb downstream 6672 true Chr07: 55940492-55947163 Sorghum bicolor
Sobic.007G134400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 55940492-55942491 Sorghum bicolor
Sobic.007G134400 5.0kb upstream 5.0kb upstream 9672 true Chr07: 55942492-55952163 Sorghum bicolor
Sobic.007G134400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 55947164-55952163 Sorghum bicolor
Sobic.007G134400 5.0kb downstream 5.0kb downstream 9672 true Chr07: 55937492-55947163 Sorghum bicolor
Sobic.007G134400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 55937492-55942491 Sorghum bicolor
Sobic.007G134400 10.0kb upstream 10.0kb upstream 14672 true Chr07: 55942492-55957163 Sorghum bicolor
Sobic.007G134400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 55947164-55957163 Sorghum bicolor
Sobic.007G134400 10.0kb downstream 10.0kb downstream 14672 true Chr07: 55932492-55947163 Sorghum bicolor
Sobic.007G134400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 55932492-55942491 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176393 5267 Panicoideae View MSA
124569951 5269 Grass View MSA
122042833 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.408        
cufflinks 11.0     High  
cufflinks 9.679     High  
cufflinks 5.315       Low
cufflinks 17.019     High High
cufflinks 9.902        
cufflinks 9.355        
cufflinks 18.945     High High
cufflinks 5.692        
cufflinks 4.247       Low
cufflinks 6.602        
cufflinks 3.473       Low
cufflinks 5.646        
cufflinks 6.208        
cufflinks 6.27        
cufflinks 9.939     High  
cufflinks 7.542        
cufflinks 8.736        
cufflinks 11.28     High  
cufflinks 5.224       Low
cufflinks 12.379        
cufflinks 8.423        
cufflinks 5.33       Low
cufflinks 5.188       Low
cufflinks 9.151     High  
cufflinks 16.64     High High
cufflinks 4.364       Low
cufflinks 9.55        
cufflinks 14.51     High High
cufflinks 9.208        

0 Strain