Gene : Sobic.007G126900 S. bicolor v3.1.1
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1331
Name:  ? Sobic.007G126900 Secondary Identifier:  ? PAC:37934681
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G126900 0.5kb upstream 0.5kb upstream 3520 true Chr07: 54089049-54092568 Sorghum bicolor
Sobic.007G126900 0.5kb upstream 0.5kb upstream 500 false Chr07: 54089049-54089548 Sorghum bicolor
Sobic.007G126900 0.5kb downstream 0.5kb downstream 3520 true Chr07: 54089549-54093068 Sorghum bicolor
Sobic.007G126900 0.5kb downstream 0.5kb downstream 500 false Chr07: 54092569-54093068 Sorghum bicolor
Sobic.007G126900 1.0kb upstream 1.0kb upstream 4020 true Chr07: 54088549-54092568 Sorghum bicolor
Sobic.007G126900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54088549-54089548 Sorghum bicolor
Sobic.007G126900 1.0kb downstream 1.0kb downstream 4020 true Chr07: 54089549-54093568 Sorghum bicolor
Sobic.007G126900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54092569-54093568 Sorghum bicolor
Sobic.007G126900 2.0kb upstream 2.0kb upstream 5020 true Chr07: 54087549-54092568 Sorghum bicolor
Sobic.007G126900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54087549-54089548 Sorghum bicolor
Sobic.007G126900 2.0kb downstream 2.0kb downstream 5020 true Chr07: 54089549-54094568 Sorghum bicolor
Sobic.007G126900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54092569-54094568 Sorghum bicolor
Sobic.007G126900 5.0kb upstream 5.0kb upstream 8020 true Chr07: 54084549-54092568 Sorghum bicolor
Sobic.007G126900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54084549-54089548 Sorghum bicolor
Sobic.007G126900 5.0kb downstream 5.0kb downstream 8020 true Chr07: 54089549-54097568 Sorghum bicolor
Sobic.007G126900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54092569-54097568 Sorghum bicolor
Sobic.007G126900 10.0kb upstream 10.0kb upstream 13020 true Chr07: 54079549-54092568 Sorghum bicolor
Sobic.007G126900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54079549-54089548 Sorghum bicolor
Sobic.007G126900 10.0kb downstream 10.0kb downstream 13020 true Chr07: 54089549-54102568 Sorghum bicolor
Sobic.007G126900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54092569-54102568 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182871 5267 Panicoideae View MSA
124574939 5269 Grass View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.607        
cufflinks 2.043       Low
cufflinks 6.718        
cufflinks 4.914        
cufflinks 5.276        
cufflinks 11.453       High
cufflinks 6.475        
cufflinks 5.599        
cufflinks 6.574        
cufflinks 6.775        
cufflinks 4.165        
cufflinks 4.42        
cufflinks 5.673        
cufflinks 4.759        
cufflinks 5.694        
cufflinks 5.178        
cufflinks 5.697        
cufflinks 7.249        
cufflinks 8.354       High
cufflinks 4.016        
cufflinks 6.547        
cufflinks 4.381        
cufflinks 4.045        
cufflinks 4.166        
cufflinks 2.058       Low
cufflinks 1.821       Low
cufflinks 4.338        
cufflinks 1.433       Low
cufflinks 15.553     High High
cufflinks 6.042        

0 Strain