Gene : Sobic.007G186000 S. bicolor v3.1.1
Defline:  (1 of 1) K01012 - biotin synthase (bioB) Genomic Order:  1944
Name:  ? Sobic.007G186000 Secondary Identifier:  ? PAC:37936223
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1507 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G186000 0.5kb upstream 0.5kb upstream 4942 true Chr07: 61876732-61881673 Sorghum bicolor
Sobic.007G186000 0.5kb upstream 0.5kb upstream 500 false Chr07: 61881174-61881673 Sorghum bicolor
Sobic.007G186000 0.5kb downstream 0.5kb downstream 4942 true Chr07: 61876232-61881173 Sorghum bicolor
Sobic.007G186000 0.5kb downstream 0.5kb downstream 500 false Chr07: 61876232-61876731 Sorghum bicolor
Sobic.007G186000 1.0kb upstream 1.0kb upstream 5442 true Chr07: 61876732-61882173 Sorghum bicolor
Sobic.007G186000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 61881174-61882173 Sorghum bicolor
Sobic.007G186000 1.0kb downstream 1.0kb downstream 5442 true Chr07: 61875732-61881173 Sorghum bicolor
Sobic.007G186000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 61875732-61876731 Sorghum bicolor
Sobic.007G186000 2.0kb upstream 2.0kb upstream 6442 true Chr07: 61876732-61883173 Sorghum bicolor
Sobic.007G186000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 61881174-61883173 Sorghum bicolor
Sobic.007G186000 2.0kb downstream 2.0kb downstream 6442 true Chr07: 61874732-61881173 Sorghum bicolor
Sobic.007G186000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 61874732-61876731 Sorghum bicolor
Sobic.007G186000 5.0kb upstream 5.0kb upstream 9442 true Chr07: 61876732-61886173 Sorghum bicolor
Sobic.007G186000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 61881174-61886173 Sorghum bicolor
Sobic.007G186000 5.0kb downstream 5.0kb downstream 9442 true Chr07: 61871732-61881173 Sorghum bicolor
Sobic.007G186000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 61871732-61876731 Sorghum bicolor
Sobic.007G186000 10.0kb upstream 10.0kb upstream 14442 true Chr07: 61876732-61891173 Sorghum bicolor
Sobic.007G186000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 61881174-61891173 Sorghum bicolor
Sobic.007G186000 10.0kb downstream 10.0kb downstream 14442 true Chr07: 61866732-61881173 Sorghum bicolor
Sobic.007G186000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 61866732-61876731 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182372 5267 Panicoideae View MSA
124572083 5269 Grass View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.916     High High
cufflinks 1.342       Low
cufflinks 5.889        
cufflinks 11.299       High
cufflinks 6.892        
cufflinks 4.571        
cufflinks 7.698        
cufflinks 3.364       Low
cufflinks 10.608        
cufflinks 10.287        
cufflinks 6.838        
cufflinks 5.486        
cufflinks 9.129        
cufflinks 5.556        
cufflinks 6.63        
cufflinks 5.652        
cufflinks 8.812        
cufflinks 8.828        
cufflinks 3.981        
cufflinks 8.668        
cufflinks 6.081        
cufflinks 5.645        
cufflinks 5.906        
cufflinks 5.724        
cufflinks 3.099       Low
cufflinks 1.158       Low
cufflinks 5.797        
cufflinks 10.128     High  
cufflinks 12.172     High High
cufflinks 7.588        

0 Strain