Gene : Sobic.007G176900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23421:SF52 - BETA-GALACTOSIDASE 11-RELATED Genomic Order:  1853
Name:  ? Sobic.007G176900 Secondary Identifier:  ? PAC:37935722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G176900 0.5kb upstream 0.5kb upstream 5277 true Chr07: 61068773-61074049 Sorghum bicolor
Sobic.007G176900 0.5kb upstream 0.5kb upstream 500 false Chr07: 61073550-61074049 Sorghum bicolor
Sobic.007G176900 0.5kb downstream 0.5kb downstream 5277 true Chr07: 61068273-61073549 Sorghum bicolor
Sobic.007G176900 0.5kb downstream 0.5kb downstream 500 false Chr07: 61068273-61068772 Sorghum bicolor
Sobic.007G176900 1.0kb upstream 1.0kb upstream 5777 true Chr07: 61068773-61074549 Sorghum bicolor
Sobic.007G176900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 61073550-61074549 Sorghum bicolor
Sobic.007G176900 1.0kb downstream 1.0kb downstream 5777 true Chr07: 61067773-61073549 Sorghum bicolor
Sobic.007G176900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 61067773-61068772 Sorghum bicolor
Sobic.007G176900 2.0kb upstream 2.0kb upstream 6777 true Chr07: 61068773-61075549 Sorghum bicolor
Sobic.007G176900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 61073550-61075549 Sorghum bicolor
Sobic.007G176900 2.0kb downstream 2.0kb downstream 6777 true Chr07: 61066773-61073549 Sorghum bicolor
Sobic.007G176900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 61066773-61068772 Sorghum bicolor
Sobic.007G176900 5.0kb upstream 5.0kb upstream 9777 true Chr07: 61068773-61078549 Sorghum bicolor
Sobic.007G176900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 61073550-61078549 Sorghum bicolor
Sobic.007G176900 5.0kb downstream 5.0kb downstream 9777 true Chr07: 61063773-61073549 Sorghum bicolor
Sobic.007G176900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 61063773-61068772 Sorghum bicolor
Sobic.007G176900 10.0kb upstream 10.0kb upstream 14777 true Chr07: 61068773-61083549 Sorghum bicolor
Sobic.007G176900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 61073550-61083549 Sorghum bicolor
Sobic.007G176900 10.0kb downstream 10.0kb downstream 14777 true Chr07: 61058773-61073549 Sorghum bicolor
Sobic.007G176900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 61058773-61068772 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175741 5267 Panicoideae View MSA
124578833 5269 Grass View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low Low
cufflinks 0.69        
cufflinks 3.822       High
cufflinks 3.451       High
cufflinks 0.488        
cufflinks 2.687        
cufflinks 0.443        
cufflinks 0.78        
cufflinks 2.272        
cufflinks 1.653        
cufflinks 0.281        
cufflinks 0.218        
cufflinks 3.219       High
cufflinks 0.19        
cufflinks 12.737     High High
cufflinks 1.289        
cufflinks 0.442        
cufflinks 0.504        
cufflinks 2.549        
cufflinks 0.55        
cufflinks 0.039     Low Low
cufflinks 0.317        
cufflinks 0.153        
cufflinks 0.141        
cufflinks 1.228        
cufflinks 0.748        
cufflinks 0.632        
cufflinks 0.047     Low Low
cufflinks 1.226        
cufflinks 3.552       High

0 Strain