Gene : Sobic.007G176800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF33 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1852
Name:  ? Sobic.007G176800 Secondary Identifier:  ? PAC:37936757
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G176800 0.5kb upstream 0.5kb upstream 3127 true Chr07: 61061043-61064169 Sorghum bicolor
Sobic.007G176800 0.5kb upstream 0.5kb upstream 500 false Chr07: 61061043-61061542 Sorghum bicolor
Sobic.007G176800 0.5kb downstream 0.5kb downstream 3127 true Chr07: 61061543-61064669 Sorghum bicolor
Sobic.007G176800 0.5kb downstream 0.5kb downstream 500 false Chr07: 61064170-61064669 Sorghum bicolor
Sobic.007G176800 1.0kb upstream 1.0kb upstream 3627 true Chr07: 61060543-61064169 Sorghum bicolor
Sobic.007G176800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 61060543-61061542 Sorghum bicolor
Sobic.007G176800 1.0kb downstream 1.0kb downstream 3627 true Chr07: 61061543-61065169 Sorghum bicolor
Sobic.007G176800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 61064170-61065169 Sorghum bicolor
Sobic.007G176800 2.0kb upstream 2.0kb upstream 4627 true Chr07: 61059543-61064169 Sorghum bicolor
Sobic.007G176800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 61059543-61061542 Sorghum bicolor
Sobic.007G176800 2.0kb downstream 2.0kb downstream 4627 true Chr07: 61061543-61066169 Sorghum bicolor
Sobic.007G176800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 61064170-61066169 Sorghum bicolor
Sobic.007G176800 5.0kb upstream 5.0kb upstream 7627 true Chr07: 61056543-61064169 Sorghum bicolor
Sobic.007G176800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 61056543-61061542 Sorghum bicolor
Sobic.007G176800 5.0kb downstream 5.0kb downstream 7627 true Chr07: 61061543-61069169 Sorghum bicolor
Sobic.007G176800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 61064170-61069169 Sorghum bicolor
Sobic.007G176800 10.0kb upstream 10.0kb upstream 12627 true Chr07: 61051543-61064169 Sorghum bicolor
Sobic.007G176800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 61051543-61061542 Sorghum bicolor
Sobic.007G176800 10.0kb downstream 10.0kb downstream 12627 true Chr07: 61061543-61074169 Sorghum bicolor
Sobic.007G176800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 61064170-61074169 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185062 5267 Panicoideae View MSA
124586574 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 159.642     High High
cufflinks 4.59       Low
cufflinks 9.921     High Low
cufflinks 18.492     High  
cufflinks 55.401     High  
cufflinks 27.288     High  
cufflinks 68.062     High  
cufflinks 28.18     High  
cufflinks 34.004     High  
cufflinks 40.576     High  
cufflinks 73.682     High  
cufflinks 81.15     High  
cufflinks 38.564     High  
cufflinks 80.002     High  
cufflinks 62.844     High  
cufflinks 7.497       Low
cufflinks 71.66     High  
cufflinks 67.279     High  
cufflinks 11.208     High Low
cufflinks 71.925     High  
cufflinks 52.075     High  
cufflinks 142.737     High High
cufflinks 97.386     High  
cufflinks 104.125     High  
cufflinks 5.036       Low
cufflinks 4.115       Low
cufflinks 103.327     High  
cufflinks 18.781     High  
cufflinks 59.85     High  
cufflinks 147.023     High High

0 Strain