Gene : Sobic.007G174701 S. bicolor v3.1.1
Defline:  (1 of 39) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  1831
Name:  ? Sobic.007G174701 Secondary Identifier:  ? PAC:37934198
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G174701 0.5kb upstream 0.5kb upstream 1217 true Chr07: 60900408-60901624 Sorghum bicolor
Sobic.007G174701 0.5kb upstream 0.5kb upstream 500 false Chr07: 60901125-60901624 Sorghum bicolor
Sobic.007G174701 0.5kb downstream 0.5kb downstream 1217 true Chr07: 60899908-60901124 Sorghum bicolor
Sobic.007G174701 0.5kb downstream 0.5kb downstream 500 false Chr07: 60899908-60900407 Sorghum bicolor
Sobic.007G174701 1.0kb upstream 1.0kb upstream 1717 true Chr07: 60900408-60902124 Sorghum bicolor
Sobic.007G174701 1.0kb upstream 1.0kb upstream 1000 false Chr07: 60901125-60902124 Sorghum bicolor
Sobic.007G174701 1.0kb downstream 1.0kb downstream 1717 true Chr07: 60899408-60901124 Sorghum bicolor
Sobic.007G174701 1.0kb downstream 1.0kb downstream 1000 false Chr07: 60899408-60900407 Sorghum bicolor
Sobic.007G174701 2.0kb upstream 2.0kb upstream 2717 true Chr07: 60900408-60903124 Sorghum bicolor
Sobic.007G174701 2.0kb upstream 2.0kb upstream 2000 false Chr07: 60901125-60903124 Sorghum bicolor
Sobic.007G174701 2.0kb downstream 2.0kb downstream 2717 true Chr07: 60898408-60901124 Sorghum bicolor
Sobic.007G174701 2.0kb downstream 2.0kb downstream 2000 false Chr07: 60898408-60900407 Sorghum bicolor
Sobic.007G174701 5.0kb upstream 5.0kb upstream 5717 true Chr07: 60900408-60906124 Sorghum bicolor
Sobic.007G174701 5.0kb upstream 5.0kb upstream 5000 false Chr07: 60901125-60906124 Sorghum bicolor
Sobic.007G174701 5.0kb downstream 5.0kb downstream 5717 true Chr07: 60895408-60901124 Sorghum bicolor
Sobic.007G174701 5.0kb downstream 5.0kb downstream 5000 false Chr07: 60895408-60900407 Sorghum bicolor
Sobic.007G174701 10.0kb upstream 10.0kb upstream 10717 true Chr07: 60900408-60911124 Sorghum bicolor
Sobic.007G174701 10.0kb upstream 10.0kb upstream 10000 false Chr07: 60901125-60911124 Sorghum bicolor
Sobic.007G174701 10.0kb downstream 10.0kb downstream 10717 true Chr07: 60890408-60901124 Sorghum bicolor
Sobic.007G174701 10.0kb downstream 10.0kb downstream 10000 false Chr07: 60890408-60900407 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192783 5267 Panicoideae View MSA
124587862 5269 Grass View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.687        
cufflinks 0.04     Low Low
cufflinks 0.124       Low
cufflinks 0.242        
cufflinks 0.222        
cufflinks 1.12        
cufflinks 0.104       Low
cufflinks 0.343        
cufflinks 0.926        
cufflinks 0.956        
cufflinks 3.687        
cufflinks 4.822        
cufflinks 0.588        
cufflinks 5.853       High
cufflinks 0.152       Low
cufflinks 0.204        
cufflinks 0.136       Low
cufflinks 0.152       Low
cufflinks 0.903        
cufflinks 0.301        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.908       High
cufflinks 8.993       High
cufflinks 10.952       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09       Low
cufflinks 0.884        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.205        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain