Gene : Sobic.007G172200 S. bicolor v3.1.1
Defline:  (1 of 1) 3.1.3.64 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase Genomic Order:  1807
Name:  ? Sobic.007G172200 Secondary Identifier:  ? PAC:37937254
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6367 Sorghum bicolor pathologic  
Sbicolor PWY-6368 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G172200 0.5kb upstream 0.5kb upstream 15505 true Chr07: 60722888-60738392 Sorghum bicolor
Sobic.007G172200 0.5kb upstream 0.5kb upstream 500 false Chr07: 60722888-60723387 Sorghum bicolor
Sobic.007G172200 0.5kb downstream 0.5kb downstream 15505 true Chr07: 60723388-60738892 Sorghum bicolor
Sobic.007G172200 0.5kb downstream 0.5kb downstream 500 false Chr07: 60738393-60738892 Sorghum bicolor
Sobic.007G172200 1.0kb upstream 1.0kb upstream 16005 true Chr07: 60722388-60738392 Sorghum bicolor
Sobic.007G172200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 60722388-60723387 Sorghum bicolor
Sobic.007G172200 1.0kb downstream 1.0kb downstream 16005 true Chr07: 60723388-60739392 Sorghum bicolor
Sobic.007G172200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 60738393-60739392 Sorghum bicolor
Sobic.007G172200 2.0kb upstream 2.0kb upstream 17005 true Chr07: 60721388-60738392 Sorghum bicolor
Sobic.007G172200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 60721388-60723387 Sorghum bicolor
Sobic.007G172200 2.0kb downstream 2.0kb downstream 17005 true Chr07: 60723388-60740392 Sorghum bicolor
Sobic.007G172200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 60738393-60740392 Sorghum bicolor
Sobic.007G172200 5.0kb upstream 5.0kb upstream 20005 true Chr07: 60718388-60738392 Sorghum bicolor
Sobic.007G172200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 60718388-60723387 Sorghum bicolor
Sobic.007G172200 5.0kb downstream 5.0kb downstream 20005 true Chr07: 60723388-60743392 Sorghum bicolor
Sobic.007G172200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 60738393-60743392 Sorghum bicolor
Sobic.007G172200 10.0kb upstream 10.0kb upstream 25005 true Chr07: 60713388-60738392 Sorghum bicolor
Sobic.007G172200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 60713388-60723387 Sorghum bicolor
Sobic.007G172200 10.0kb downstream 10.0kb downstream 25005 true Chr07: 60723388-60748392 Sorghum bicolor
Sobic.007G172200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 60738393-60748392 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188566 5267 Panicoideae View MSA
124570389 5269 Grass View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58       Low
cufflinks 2.747        
cufflinks 2.395        
cufflinks 2.064       Low
cufflinks 4.079       High
cufflinks 3.503        
cufflinks 2.582        
cufflinks 2.465        
cufflinks 4.23       High
cufflinks 4.529       High
cufflinks 2.308        
cufflinks 2.428        
cufflinks 4.393       High
cufflinks 2.244        
cufflinks 4.599       High
cufflinks 2.707        
cufflinks 2.685        
cufflinks 2.624        
cufflinks 3.419        
cufflinks 2.614        
cufflinks 3.597        
cufflinks 2.199       Low
cufflinks 2.531        
cufflinks 2.134       Low
cufflinks 3.548        
cufflinks 2.936        
cufflinks 3.165        
cufflinks 3.267        
cufflinks 2.419        
cufflinks 4.172       High

0 Strain