Gene : Sobic.007G168000 S. bicolor v3.1.1
Defline:  (1 of 3) 3.1.1.14 - Chlorophyllase Genomic Order:  1767
Name:  ? Sobic.007G168000 Secondary Identifier:  ? PAC:37935307
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5098 Sorghum bicolor pathologic  
Sbicolor PWY-6927 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G168000 0.5kb upstream 0.5kb upstream 2863 true Chr07: 60307405-60310267 Sorghum bicolor
Sobic.007G168000 0.5kb upstream 0.5kb upstream 500 false Chr07: 60307405-60307904 Sorghum bicolor
Sobic.007G168000 0.5kb downstream 0.5kb downstream 2863 true Chr07: 60307905-60310767 Sorghum bicolor
Sobic.007G168000 0.5kb downstream 0.5kb downstream 500 false Chr07: 60310268-60310767 Sorghum bicolor
Sobic.007G168000 1.0kb upstream 1.0kb upstream 3363 true Chr07: 60306905-60310267 Sorghum bicolor
Sobic.007G168000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 60306905-60307904 Sorghum bicolor
Sobic.007G168000 1.0kb downstream 1.0kb downstream 3363 true Chr07: 60307905-60311267 Sorghum bicolor
Sobic.007G168000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 60310268-60311267 Sorghum bicolor
Sobic.007G168000 2.0kb upstream 2.0kb upstream 4363 true Chr07: 60305905-60310267 Sorghum bicolor
Sobic.007G168000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 60305905-60307904 Sorghum bicolor
Sobic.007G168000 2.0kb downstream 2.0kb downstream 4363 true Chr07: 60307905-60312267 Sorghum bicolor
Sobic.007G168000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 60310268-60312267 Sorghum bicolor
Sobic.007G168000 5.0kb upstream 5.0kb upstream 7363 true Chr07: 60302905-60310267 Sorghum bicolor
Sobic.007G168000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 60302905-60307904 Sorghum bicolor
Sobic.007G168000 5.0kb downstream 5.0kb downstream 7363 true Chr07: 60307905-60315267 Sorghum bicolor
Sobic.007G168000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 60310268-60315267 Sorghum bicolor
Sobic.007G168000 10.0kb upstream 10.0kb upstream 12363 true Chr07: 60297905-60310267 Sorghum bicolor
Sobic.007G168000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 60297905-60307904 Sorghum bicolor
Sobic.007G168000 10.0kb downstream 10.0kb downstream 12363 true Chr07: 60307905-60320267 Sorghum bicolor
Sobic.007G168000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 60310268-60320267 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994831 5273 Angiosperm View MSA
122196661 5267 Panicoideae View MSA
124585797 5269 Grass View MSA
121265043 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101        
cufflinks 0.897        
cufflinks 19.718     High High
cufflinks 0.004     Low Low
cufflinks 0.302        
cufflinks 0.036     Low  
cufflinks 7.355       High
cufflinks 1.843        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.033     Low  
cufflinks 0.006     Low Low
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111        
cufflinks 80.143     High High
cufflinks 2.973        
cufflinks 5.568       High
cufflinks 42.576     High High
cufflinks 5.048       High
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.03     Low  
cufflinks 0.669        
cufflinks 0.021     Low  
cufflinks 0.034     Low  
cufflinks 8.549       High
cufflinks 0.029     Low  

0 Strain